Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G275000.1 | Wheat | nucleus | 93.04 | 93.04 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 95.89 | 80.37 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 86.08 | 79.07 |
| Os05t0440000-00 | Rice | nucleus | 68.67 | 66.36 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 61.08 | 59.02 |
| EES18302 | Sorghum | plastid | 63.61 | 54.92 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 55.06 | 52.57 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.47 | 28.4 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.78 | 25.62 |
| CDY50231 | Canola | nucleus | 20.25 | 25.3 |
| Bra017906.1-P | Field mustard | nucleus | 20.25 | 25.3 |
| CDY04620 | Canola | nucleus | 20.25 | 25.2 |
| PGSC0003DMT400002060 | Potato | nucleus | 20.89 | 24.81 |
| Solyc04g070960.1.1 | Tomato | nucleus | 20.89 | 24.72 |
| CDY00373 | Canola | nucleus | 20.25 | 24.62 |
| AT1G21340.1 | Thale cress | nucleus | 20.25 | 24.62 |
| KRH64521 | Soybean | nucleus | 22.15 | 24.22 |
| Bra012277.1-P | Field mustard | nucleus | 19.94 | 24.14 |
| CDY61064 | Canola | nucleus | 19.94 | 24.14 |
| KRH53419 | Soybean | nucleus | 21.84 | 23.88 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 18.99 | 20.76 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 24.68 | 20.74 |
| TraesCS6B01G301500.1 | Wheat | nucleus | 19.62 | 20.26 |
| TraesCS2B01G094000.1 | Wheat | nucleus | 20.25 | 19.39 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 23.1 | 18.77 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 18.67 | 18.5 |
| TraesCS5B01G087600.3 | Wheat | nucleus | 19.94 | 18.31 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 21.2 | 18.26 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 19.62 | 17.46 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 18.67 | 17.46 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 20.57 | 17.2 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 18.99 | 16.9 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 19.94 | 16.76 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 18.35 | 16.71 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 18.35 | 16.48 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 19.3 | 15.97 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 21.52 | 15.04 |
| TraesCS1B01G185700.1 | Wheat | cytosol | 6.01 | 8.76 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G284300.1 | EnsemblPlantsGene:TraesCS1B01G284300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF72 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr1B:+:493857643..493858859
Molecular Weight (calculated)
33589.3 Da
IEP (calculated)
5.362
GRAVY (calculated)
-0.406
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHCESML AYAAAAGRRA MLVDPRRYRP NVEVAPNCPR CDSPNTKFCY YNNYSLSQPR YFCKGCRRYW TKGGSLRNVP VGGGCRKNRR GKPVRSMAEA
101: DTASPNHGAV VFSHRFHGPV RPDLLLEGMV GNPAELGQQP ASAEADKPAG AADGPTIDLA LLYSKFLSHQ PLAEQCAVVP ESADTSSGSS TEMSPPTLSG
201: PSQHGPGEIC GPASSTEPSA TTMLQCADAR AHALGEFNFS VDQSCYDSLG LPTDGGDLTM LPSAWDQEAK YEPFSSLPEE DAMSLHEGVP AGDDVWSKVL
301: GCQGLEAALA AGLDRC
101: DTASPNHGAV VFSHRFHGPV RPDLLLEGMV GNPAELGQQP ASAEADKPAG AADGPTIDLA LLYSKFLSHQ PLAEQCAVVP ESADTSSGSS TEMSPPTLSG
201: PSQHGPGEIC GPASSTEPSA TTMLQCADAR AHALGEFNFS VDQSCYDSLG LPTDGGDLTM LPSAWDQEAK YEPFSSLPEE DAMSLHEGVP AGDDVWSKVL
301: GCQGLEAALA AGLDRC
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.