Factsheet for Bra017906.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50231	Canola	nucleus	96.44	96.44
AT1G21340.1	Thale cress	nucleus	83.0	80.77
Bra012277.1-P	Field mustard	nucleus	81.03	78.54
KRH53419	Soybean	nucleus	34.78	30.45
Bra006923.1-P	Field mustard	nucleus	28.46	29.75
Solyc04g070960.1.1	Tomato	nucleus	30.83	29.21
KRH64521	Soybean	nucleus	33.2	29.07
Bra012804.1-P	Field mustard	nucleus	27.67	29.05
PGSC0003DMT400002060	Potato	nucleus	30.43	28.95
VIT_18s0001g15730.t01	Wine grape	nucleus	31.62	28.47
Bra009587.1-P	Field mustard	nucleus	18.58	26.55
Bra020261.1-P	Field mustard	nucleus	24.11	25.63
Bra035696.1-P	Field mustard	nucleus	25.69	25.39
Bra002504.1-P	Field mustard	nucleus	23.72	23.26
GSMUA_Achr8P32880_001	Banana	nucleus	22.53	22.8
Bra035956.1-P	Field mustard	nucleus	22.92	21.72
Bra006675.1-P	Field mustard	nucleus	23.32	21.3
Bra029352.1-P	Field mustard	nucleus	22.53	20.5
Bra013003.1-P	Field mustard	nucleus	23.72	20.41
Bra027722.1-P	Field mustard	nucleus	26.09	20.37
TraesCS1B01G284300.1	Wheat	nucleus	25.3	20.25
TraesCS3B01G409600.1	Wheat	nucleus	26.48	20.24
HORVU3Hr1G083460.1	Barley	nucleus	26.48	20.24
TraesCS3D01G370100.1	Wheat	nucleus	26.48	20.24
TraesCS3A01G377000.1	Wheat	nucleus	26.48	20.24
EES03938	Sorghum	nucleus	26.48	20.0
Zm00001d042736_P001	Maize	nucleus	25.69	20.0
TraesCS1A01G275000.1	Wheat	nucleus	24.9	19.94
Os05t0440000-00	Rice	nucleus	25.69	19.88
Os01t0865800-00	Rice	nucleus	25.69	19.76
Bra013758.1-P	Field mustard	nucleus	26.09	19.64
Zm00001d038281_P001	Maize	mitochondrion, nucleus	25.3	19.57
Bra000008.1-P	Field mustard	nucleus	22.13	19.11
Bra019247.1-P	Field mustard	nucleus	25.3	18.66
Bra010548.1-P	Field mustard	nucleus	25.69	18.47
Bra037401.1-P	Field mustard	nucleus	21.74	18.46
Bra031853.1-P	Field mustard	nucleus	22.13	18.42
Bra014418.1-P	Field mustard	nucleus	22.53	18.39
Zm00001d012280_P001	Maize	nucleus	24.51	18.34
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	24.9	18.31
EES18302	Sorghum	plastid	26.09	18.03
Bra037822.1-P	Field mustard	nucleus	20.16	17.96
Bra005181.1-P	Field mustard	nucleus	22.92	17.85
Bra017171.1-P	Field mustard	nucleus	21.74	17.8
Bra035873.1-P	Field mustard	nucleus	23.72	17.65
Bra010884.1-P	Field mustard	nucleus	20.55	17.63
TraesCS1D01G274700.1	Wheat	mitochondrion	26.09	17.51
Bra032891.1-P	Field mustard	nucleus	20.16	17.17
Bra024399.1-P	Field mustard	nucleus	20.55	16.99
Bra030089.1-P	Field mustard	nucleus	19.76	16.78
Bra004525.1-P	Field mustard	nucleus	23.32	16.76
Bra010136.1-P	Field mustard	nucleus	23.72	16.3
Bra039272.1-P	Field mustard	nucleus, plastid	22.92	16.11
Bra000429.1-P	Field mustard	nucleus	23.32	15.99
Bra014752.1-P	Field mustard	nucleus	21.34	15.43
Bra007156.1-P	Field mustard	nucleus	19.76	15.29
Bra030696.1-P	Field mustard	nucleus	20.16	15.27
Bra035667.1-P	Field mustard	nucleus	19.37	14.24
Bra005725.1-P	Field mustard	nucleus	21.34	13.4
Bra031588.1-P	Field mustard	nucleus	16.6	13.25
Bra028872.1-P	Field mustard	nucleus	20.95	13.05
Bra009588.1-P	Field mustard	plastid	2.77	3.93

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra017906	EnsemblPlants:Bra017906.1	EnsemblPlants:Bra017906.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4DN19	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF15	UniParc:UPI000253F0BD	InterPro:Znf_Dof	SEG:seg	:

Description

AT1G21340 (E=4e-109) | Dof-type zinc finger domain-containing protein

Coordinates

chrA06:+:8780667..8781428

Molecular Weight (calculated)

28548.7 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.800

Length

253 amino acids

Sequence
(BLAST)

001: MMLPYNAHNS YQHQFPSPEL EIPEKWKVPY GHDETAPPCP RCASSNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNI PVGGGCRKRS RSRNNSHKRF
101: GRNQNLQPDG LINQDLGSQS SHAGSDIDLA AVFAQYVTNG SPSSTDNTTG SDQDSPLTTT TTHALDSLTW DICQETDVNL EFYGTEKIQD GFGQFLQEDE
201: EEMFEFQGLL DDKEIQEILD CSFTEEPDKL ISQGSFMIDG DHWSSTDLAT FGI

Best Arabidopsis Sequence Match ( AT1G21340.1 )
(BLAST)

001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI

Arabidopsis Description

DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.