Factsheet for Bra017171.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
nucleus 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65260	Canola	nucleus	99.68	99.68
Bra005181.1-P	Field mustard	nucleus	89.64	85.23
Bra000008.1-P	Field mustard	nucleus	77.02	81.23
AT2G37590.1	Thale cress	nucleus	85.11	79.7
Bra009587.1-P	Field mustard	nucleus	27.51	48.02
VIT_08s0007g00180.t01	Wine grape	nucleus	45.31	40.58
Zm00001d034653_P001	Maize	nucleus	28.8	39.73
Solyc10g086440.1.1	Tomato	nucleus	40.78	34.81
PGSC0003DMT400049288	Potato	nucleus	41.1	33.96
Bra005725.1-P	Field mustard	nucleus	42.72	32.75
Bra014752.1-P	Field mustard	nucleus	36.57	32.29
Bra028872.1-P	Field mustard	nucleus	42.39	32.27
Bra007156.1-P	Field mustard	nucleus	33.33	31.5
Zm00001d034651_P002	Maize	nucleus	40.78	30.51
Os03t0821200-00	Rice	nucleus	40.78	30.43
HORVU5Hr1G113190.2	Barley	nucleus, plastid	27.83	30.07
Bra030696.1-P	Field mustard	nucleus	32.36	29.94
KXG37254	Sorghum	nucleus	41.75	29.66
Bra035667.1-P	Field mustard	nucleus	31.39	28.2
Bra031588.1-P	Field mustard	nucleus	28.8	28.08
HORVU5Hr1G113220.6	Barley	nucleus	40.45	27.78
TraesCS5B01G492600.1	Wheat	nucleus	40.13	27.43
TraesCS5D01G493000.1	Wheat	nucleus	39.81	27.03
TraesCS5A01G479400.1	Wheat	nucleus	40.78	26.98
Bra012804.1-P	Field mustard	nucleus	19.74	25.31
Bra035696.1-P	Field mustard	nucleus	20.06	24.22
Bra002504.1-P	Field mustard	nucleus	20.06	24.03
Bra020261.1-P	Field mustard	nucleus	18.45	23.95
Bra006923.1-P	Field mustard	nucleus	18.45	23.55
Bra013003.1-P	Field mustard	nucleus	21.04	22.11
Bra029352.1-P	Field mustard	nucleus	19.74	21.94
Bra017906.1-P	Field mustard	nucleus	17.8	21.74
Bra019247.1-P	Field mustard	nucleus	23.95	21.57
Bra024399.1-P	Field mustard	nucleus	21.36	21.57
Bra032891.1-P	Field mustard	nucleus	20.71	21.55
Bra037822.1-P	Field mustard	nucleus	19.74	21.48
Bra035956.1-P	Field mustard	nucleus	18.45	21.35
Bra014418.1-P	Field mustard	nucleus	21.36	21.29
Bra035873.1-P	Field mustard	nucleus	23.3	21.18
Bra030089.1-P	Field mustard	nucleus	20.39	21.14
Bra031853.1-P	Field mustard	nucleus	20.71	21.05
Bra006675.1-P	Field mustard	nucleus	18.77	20.94
Bra013758.1-P	Field mustard	nucleus	22.65	20.83
Bra009588.1-P	Field mustard	plastid	11.97	20.79
Bra027722.1-P	Field mustard	nucleus	21.68	20.68
Bra010884.1-P	Field mustard	nucleus	19.74	20.68
Bra012277.1-P	Field mustard	nucleus	16.83	19.92
Zm00001d012963_P001	Maize	plastid, vacuole	40.45	19.9
Bra004525.1-P	Field mustard	nucleus	22.65	19.89
Bra010548.1-P	Field mustard	nucleus	22.65	19.89
Bra010136.1-P	Field mustard	nucleus	23.3	19.57
Bra000429.1-P	Field mustard	nucleus	22.98	19.24
Bra037401.1-P	Field mustard	nucleus	18.45	19.13
Bra039272.1-P	Field mustard	nucleus, plastid	22.01	18.89
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	4.21	5.88

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra017171	EnsemblPlants:Bra017171.1	EnsemblPlants:Bra017171.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	UniProt:M4DKZ0	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI0002544616	InterPro:Znf_Dof	SEG:seg	:

Description

AT2G37590 (E=2e-113) ATDOF2.4, DOF2.4 | Dof-type zinc finger domain-containing protein

Coordinates

chrA04:+:16213077..16214340

Molecular Weight (calculated)

33119.9 Da

IEP (calculated)

9.120

GRAVY (calculated)

-0.711

Length

309 amino acids

Sequence
(BLAST)

001: MVFSSIQAYL DSSNWQQAPP SNYNQSGAGA SATGGHDPGP QLQPQSQPQS NGSGSSGSIR PGSMVDRARQ ANVAIPEAAL KCPRCESTNT KFCYFNNHSL
101: TQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNRRTKSSNN NNNSTVTSNN SSFSSAASGN ASTISAILSS NYGGNQESFL SQILSPVRLM NTTYTTDNSM
201: SLLNSGGLNQ DLRSIQMGNS GGSLMSCVDE WRSTSHHQQP QILGGGNCEA YSNTNPSSNG FYPFESPRIT SALASQSSSV KVEDNPYKWV NVNGNCSSWT
301: DLSTFGSSR

Best Arabidopsis Sequence Match ( AT2G37590.1 )
(BLAST)

001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR

Arabidopsis Description

DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.