Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90602 | Canola | nucleus | 100.0 | 100.0 |
| CDY29082 | Canola | nucleus | 97.51 | 97.92 |
| Bra006923.1-P | Field mustard | nucleus | 82.16 | 81.82 |
| AT3G52440.2 | Thale cress | nucleus | 83.4 | 75.56 |
| KRG96269 | Soybean | nucleus | 32.37 | 45.35 |
| KRG96256 | Soybean | nucleus | 39.0 | 34.69 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 38.17 | 34.07 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 32.37 | 30.12 |
| PGSC0003DMT400055052 | Potato | nucleus | 38.17 | 29.39 |
| Bra009587.1-P | Field mustard | nucleus | 21.16 | 28.81 |
| Bra012277.1-P | Field mustard | nucleus | 30.71 | 28.35 |
| Bra017906.1-P | Field mustard | nucleus | 29.05 | 27.67 |
| Bra020261.1-P | Field mustard | nucleus | 24.48 | 24.79 |
| Bra035696.1-P | Field mustard | nucleus | 25.31 | 23.83 |
| Bra002504.1-P | Field mustard | nucleus | 24.48 | 22.87 |
| Bra037401.1-P | Field mustard | nucleus | 27.39 | 22.15 |
| Bra014418.1-P | Field mustard | nucleus | 26.97 | 20.97 |
| Bra006675.1-P | Field mustard | nucleus | 23.65 | 20.58 |
| Bra000008.1-P | Field mustard | nucleus | 24.9 | 20.48 |
| Bra035956.1-P | Field mustard | nucleus | 22.41 | 20.22 |
| Bra005181.1-P | Field mustard | nucleus | 26.97 | 20.0 |
| Bra017171.1-P | Field mustard | nucleus | 25.31 | 19.74 |
| Bra000429.1-P | Field mustard | nucleus | 29.88 | 19.51 |
| Bra013003.1-P | Field mustard | nucleus | 23.65 | 19.39 |
| Bra004525.1-P | Field mustard | nucleus | 28.22 | 19.32 |
| Bra027722.1-P | Field mustard | nucleus | 25.73 | 19.14 |
| Bra031853.1-P | Field mustard | nucleus | 24.07 | 19.08 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 28.22 | 18.89 |
| Bra029352.1-P | Field mustard | nucleus | 21.16 | 18.35 |
| Bra013758.1-P | Field mustard | nucleus | 25.31 | 18.15 |
| Bra019247.1-P | Field mustard | nucleus | 25.73 | 18.08 |
| Bra007156.1-P | Field mustard | nucleus | 24.48 | 18.04 |
| Bra024399.1-P | Field mustard | nucleus | 22.82 | 17.97 |
| Bra010884.1-P | Field mustard | nucleus | 21.99 | 17.97 |
| Bra030696.1-P | Field mustard | nucleus | 24.9 | 17.96 |
| Bra010548.1-P | Field mustard | nucleus | 26.14 | 17.9 |
| Bra035873.1-P | Field mustard | nucleus | 24.48 | 17.35 |
| Bra037822.1-P | Field mustard | nucleus | 20.33 | 17.25 |
| Bra014752.1-P | Field mustard | nucleus | 24.9 | 17.14 |
| Bra032891.1-P | Field mustard | nucleus | 20.75 | 16.84 |
| Bra030089.1-P | Field mustard | nucleus | 20.33 | 16.44 |
| Bra035667.1-P | Field mustard | nucleus | 23.24 | 16.28 |
| Bra005725.1-P | Field mustard | nucleus | 26.97 | 16.13 |
| Bra010136.1-P | Field mustard | nucleus | 24.48 | 16.03 |
| Bra031588.1-P | Field mustard | nucleus | 20.75 | 15.77 |
| Bra028872.1-P | Field mustard | nucleus | 25.31 | 15.02 |
| Bra009588.1-P | Field mustard | plastid | 3.73 | 5.06 |
Protein Annotations
| MapMan:15.5.1.5 | EnsemblPlantsGene:Bra012804 | EnsemblPlants:Bra012804.1 | EnsemblPlants:Bra012804.1-P | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | UniProt:M4D8J4 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF73 | UniParc:UPI00025407C5 | InterPro:Znf_Dof | SEG:seg | : |
Description
AT3G52440 (E=2e-099) | Dof-type zinc finger domain-containing protein
Coordinates
chrA03:+:22138038..22138763
Molecular Weight (calculated)
26418.2 Da
IEP (calculated)
5.496
GRAVY (calculated)
-0.595
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRT KSSSSNAKTG VTASSCNSGG
101: GSPNIDLALV YANFLNPKPD EPTLRETCDL ATGASMEPSN WSIDIGDDHH HHHYDHQVEH IIEECGYNGL PPFPGEELLS IDTNSVWSDA LLIGHNNHIE
201: VGGVTSAETV HEPVVNFADE SNDSTNFLFG SWSPFDFSTD G
101: GSPNIDLALV YANFLNPKPD EPTLRETCDL ATGASMEPSN WSIDIGDDHH HHHYDHQVEH IIEECGYNGL PPFPGEELLS IDTNSVWSDA LLIGHNNHIE
201: VGGVTSAETV HEPVVNFADE SNDSTNFLFG SWSPFDFSTD G
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.