Factsheet for Bra035696.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53379	Canola	nucleus	84.77	99.09
AT2G28510.1	Thale cress	nucleus	78.52	69.79
PGSC0003DMT400075051	Potato	nucleus	42.97	37.8
Solyc06g005130.2.1	Tomato	nucleus	43.36	36.04
Bra020261.1-P	Field mustard	nucleus	27.34	29.41
Bra002504.1-P	Field mustard	nucleus	27.34	27.13
Bra009587.1-P	Field mustard	nucleus	18.75	27.12
Bra017906.1-P	Field mustard	nucleus	25.39	25.69
Bra012804.1-P	Field mustard	nucleus	23.83	25.31
Bra012277.1-P	Field mustard	nucleus	25.78	25.29
Bra006675.1-P	Field mustard	nucleus	27.34	25.27
Bra006923.1-P	Field mustard	nucleus	23.44	24.79
VIT_06s0004g03420.t01	Wine grape	nucleus	28.52	24.66
KRH24943	Soybean	nucleus	29.3	24.59
Solyc06g075370.2.1	Tomato	nucleus	28.52	24.09
KRG89059	Soybean	nucleus	28.91	23.87
PGSC0003DMT400019416	Potato	nucleus	28.12	23.84
GSMUA_Achr10P...	Banana	nucleus	24.61	23.16
Solyc11g072500.1.1	Tomato	nucleus	25.78	23.16
GSMUA_Achr10P...	Banana	nucleus	25.39	22.81
GSMUA_Achr3P13830_001	Banana	nucleus	24.22	22.79
GSMUA_Achr11P...	Banana	nucleus	23.44	22.64
GSMUA_Achr11P...	Banana	nucleus	26.17	22.64
PGSC0003DMT400065271	Potato	nucleus	26.17	22.41
GSMUA_Achr9P04290_001	Banana	nucleus	25.39	22.34
GSMUA_Achr5P07290_001	Banana	nucleus	23.83	22.26
KRH10402	Soybean	nucleus	24.61	22.11
KRH22943	Soybean	nucleus	24.61	22.11
Bra035956.1-P	Field mustard	nucleus	22.27	21.35
Bra000008.1-P	Field mustard	nucleus	23.83	20.82
Bra037401.1-P	Field mustard	nucleus	23.83	20.47
Bra013003.1-P	Field mustard	nucleus	23.44	20.41
Bra005181.1-P	Field mustard	nucleus	25.78	20.31
Bra029352.1-P	Field mustard	nucleus	21.88	20.14
Bra031853.1-P	Field mustard	nucleus	23.83	20.07
Bra017171.1-P	Field mustard	nucleus	24.22	20.06
Bra014418.1-P	Field mustard	nucleus	23.44	19.35
Bra024399.1-P	Field mustard	nucleus	22.66	18.95
Bra037822.1-P	Field mustard	nucleus	20.7	18.66
Bra035873.1-P	Field mustard	nucleus	24.61	18.53
Bra004525.1-P	Field mustard	nucleus	25.39	18.47
Bra013758.1-P	Field mustard	nucleus	24.22	18.45
Bra019247.1-P	Field mustard	nucleus	24.61	18.37
Bra010884.1-P	Field mustard	nucleus	21.09	18.31
Bra032891.1-P	Field mustard	nucleus	21.09	18.18
Bra007156.1-P	Field mustard	nucleus	22.66	17.74
Bra027722.1-P	Field mustard	nucleus	22.27	17.59
Bra030089.1-P	Field mustard	nucleus	20.31	17.45
Bra000429.1-P	Field mustard	nucleus	25.0	17.34
Bra010136.1-P	Field mustard	nucleus	24.61	17.12
Bra010548.1-P	Field mustard	nucleus	23.05	16.76
Bra039272.1-P	Field mustard	nucleus, plastid	23.44	16.67
Bra014752.1-P	Field mustard	nucleus	22.66	16.57
Bra030696.1-P	Field mustard	nucleus	21.48	16.47
Bra035667.1-P	Field mustard	nucleus	20.7	15.41
Bra031588.1-P	Field mustard	nucleus	18.75	15.14
Bra005725.1-P	Field mustard	nucleus	23.05	14.64
Bra028872.1-P	Field mustard	nucleus	22.66	14.29
Bra009588.1-P	Field mustard	plastid	4.3	6.18

Protein Annotations

MapMan:15.5.1.5	EnsemblPlantsGene:Bra035696	EnsemblPlants:Bra035696.1	EnsemblPlants:Bra035696.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003851	UniProt:M4F3P6	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361
PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF69	UniParc:UPI0002543E46	InterPro:Znf_Dof	SEG:seg

Description

AT2G28510 (E=7e-080) | Dof-type zinc finger domain-containing protein

Coordinates

chrA04:-:12759298..12760068

Molecular Weight (calculated)

27919.4 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.739

Length

256 amino acids

Sequence
(BLAST)

001: MEEEMKKKQG KGELEGEAQK CPRCESPNTK FCYYNNYSLS QPRYFCKSCR RYWTKGGTLR NVPVGGGCRR NKRSSSSFSK NINKPINFHN DPLHNPFTGM
101: PSSFGYDSID LNLAFAALHK HPPSQVTPSF GFGGDVSIYG NSTNTHSGVL GNGLNFGEQN GNFNGGSLWY GFMSGNESEN KTTSALGIPL EGNETKQENV
201: NNNNNILGNP SKVLLGFPWQ ITGNSAGGVP ETDPGRESWN GLVSSWSSGL LNTPLV

Best Arabidopsis Sequence Match ( AT2G28510.1 )
(BLAST)

001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV

Arabidopsis Description

DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.