Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035696.1-P | Field mustard | nucleus | 99.09 | 84.77 |
| CDX77184 | Canola | nucleus | 94.98 | 81.25 |
| AT2G28510.1 | Thale cress | nucleus | 79.91 | 60.76 |
| CDY70840 | Canola | nucleus | 20.55 | 39.82 |
| PGSC0003DMT400075051 | Potato | nucleus | 46.12 | 34.71 |
| Solyc06g005130.2.1 | Tomato | nucleus | 47.03 | 33.44 |
| CDY09221 | Canola | nucleus | 32.88 | 27.91 |
| CDX80191 | Canola | nucleus | 32.42 | 27.63 |
| CDY31568 | Canola | nucleus | 32.42 | 27.52 |
| CDX71050 | Canola | nucleus | 31.05 | 26.88 |
| CDY08775 | Canola | nucleus | 23.29 | 26.02 |
| CDY07781 | Canola | nucleus | 25.11 | 25.7 |
| CDX88742 | Canola | nucleus | 32.42 | 25.63 |
| CDY29082 | Canola | nucleus | 27.85 | 25.42 |
| CDX90602 | Canola | nucleus | 27.85 | 25.31 |
| CDY50231 | Canola | nucleus | 29.22 | 25.3 |
| CDY04620 | Canola | nucleus | 29.22 | 25.2 |
| CDY00373 | Canola | nucleus | 29.68 | 25.0 |
| CDX78095 | Canola | nucleus | 27.4 | 24.79 |
| CDY59600 | Canola | nucleus | 27.4 | 24.59 |
| CDY61064 | Canola | nucleus | 29.22 | 24.52 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 31.96 | 23.65 |
| KRH24943 | Soybean | nucleus | 32.88 | 23.61 |
| Solyc06g075370.2.1 | Tomato | nucleus | 32.42 | 23.43 |
| PGSC0003DMT400019416 | Potato | nucleus | 31.96 | 23.18 |
| KRG89059 | Soybean | nucleus | 32.42 | 22.9 |
| Solyc11g072500.1.1 | Tomato | nucleus | 29.68 | 22.81 |
| GSMUA_Achr10P... | Banana | nucleus | 29.68 | 22.81 |
| GSMUA_Achr10P... | Banana | nucleus | 28.31 | 22.79 |
| GSMUA_Achr11P... | Banana | nucleus | 27.4 | 22.64 |
| CDX87189 | Canola | nucleus | 25.57 | 22.4 |
| GSMUA_Achr11P... | Banana | nucleus | 30.14 | 22.3 |
| PGSC0003DMT400065271 | Potato | nucleus | 30.14 | 22.07 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 27.4 | 22.06 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 29.22 | 21.99 |
| CDY16836 | Canola | nucleus | 26.03 | 21.35 |
| CDY51722 | Canola | nucleus | 26.94 | 21.22 |
| CDY07156 | Canola | nucleus | 26.94 | 21.15 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 26.03 | 20.8 |
| KRH10402 | Soybean | nucleus | 26.94 | 20.7 |
| KRH22943 | Soybean | nucleus | 26.94 | 20.7 |
| CDY40813 | Canola | nucleus | 26.48 | 20.49 |
| CDX79743 | Canola | nucleus | 27.4 | 20.48 |
| CDY02191 | Canola | nucleus | 27.4 | 20.41 |
| CDY42836 | Canola | nucleus | 26.48 | 20.28 |
| CDY72657 | Canola | nucleus | 26.94 | 20.21 |
| CDX93365 | Canola | nucleus | 27.4 | 19.42 |
| CDY65260 | Canola | nucleus | 27.4 | 19.42 |
| CDX74947 | Canola | nucleus | 28.77 | 19.38 |
| CDX91370 | Canola | nucleus | 28.77 | 19.38 |
| CDX73385 | Canola | nucleus | 26.48 | 19.21 |
| CDY33948 | Canola | nucleus | 26.48 | 19.21 |
| CDX86775 | Canola | nucleus | 26.94 | 18.97 |
| CDY37834 | Canola | nucleus | 26.03 | 18.75 |
| CDY70838 | Canola | nucleus | 26.03 | 18.63 |
| CDY16754 | Canola | nucleus | 28.77 | 18.53 |
| CDX71704 | Canola | nucleus | 28.31 | 18.51 |
| CDX87270 | Canola | nucleus | 28.77 | 18.48 |
| CDY64622 | Canola | nucleus | 26.94 | 18.27 |
| CDY71684 | Canola | nucleus | 27.85 | 18.21 |
| CDY72049 | Canola | nucleus | 24.66 | 18.18 |
| CDY70666 | Canola | nucleus | 24.66 | 18.18 |
| CDX92613 | Canola | nucleus | 28.31 | 18.08 |
| CDY71763 | Canola | nucleus | 28.31 | 18.08 |
| CDY03494 | Canola | nucleus | 28.31 | 18.02 |
| CDY70312 | Canola | nucleus | 23.29 | 17.96 |
| CDY69145 | Canola | nucleus, plastid | 25.57 | 17.78 |
| CDY41539 | Canola | nucleus | 29.68 | 17.76 |
| CDX81292 | Canola | nucleus | 22.83 | 17.73 |
| CDY35729 | Canola | nucleus | 24.2 | 17.73 |
| CDX80030 | Canola | nucleus | 29.22 | 17.58 |
| CDY08392 | Canola | nucleus | 26.94 | 17.46 |
| CDY57876 | Canola | nucleus | 28.77 | 17.45 |
| CDY00341 | Canola | nucleus | 29.22 | 17.39 |
| CDX84369 | Canola | nucleus | 29.22 | 17.25 |
| CDX90142 | Canola | nucleus | 24.66 | 17.09 |
| CDY35454 | Canola | nucleus | 26.48 | 16.96 |
| CDX89134 | Canola | extracellular, vacuole | 26.94 | 16.95 |
| CDX95706 | Canola | nucleus | 28.31 | 16.8 |
| CDX83357 | Canola | nucleus | 28.31 | 16.58 |
| CDY40358 | Canola | nucleus | 25.11 | 16.52 |
| CDY27314 | Canola | nucleus | 26.48 | 16.11 |
| CDX95139 | Canola | nucleus | 24.66 | 16.07 |
| CDY15678 | Canola | nucleus | 23.74 | 15.9 |
| CDY15624 | Canola | nucleus | 24.2 | 15.87 |
| CDY61727 | Canola | nucleus | 26.94 | 15.78 |
| CDY70704 | Canola | nucleus | 26.03 | 15.62 |
| CDY66590 | Canola | nucleus | 23.29 | 15.6 |
| CDX77212 | Canola | nucleus | 23.74 | 15.29 |
| CDY40213 | Canola | nucleus | 24.66 | 15.21 |
| CDY31735 | Canola | nucleus | 23.29 | 14.83 |
| CDX76102 | Canola | nucleus | 25.57 | 14.7 |
| CDY61965 | Canola | nucleus | 20.55 | 14.47 |
| CDY06274 | Canola | nucleus | 20.55 | 14.33 |
| CDY55549 | Canola | nucleus | 26.03 | 14.18 |
| CDX80822 | Canola | nucleus | 26.03 | 14.04 |
| CDY55422 | Canola | nucleus | 25.11 | 13.72 |
| CDY04855 | Canola | nucleus | 25.11 | 13.55 |
| CDY24798 | Canola | nucleus | 26.94 | 13.02 |
| CDY08776 | Canola | nucleus | 2.74 | 6.98 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IVC3 | UniProt:A0A078IVC3 | EnsemblPlants:CDY53379 | ProteinID:CDY53379 | ProteinID:CDY53379.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00010594001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | UniParc:UPI0004EF3EF0 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g16440DBnaA04g16440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVC3]
Coordinates
chrLK033195:-:12211..13783
Molecular Weight (calculated)
24016.0 Da
IEP (calculated)
8.989
GRAVY (calculated)
-0.711
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEMKKKQG KGELEGEAQK CPRCESPNTK FCYYNNYSLS QPRYFCKSCR RYWTKGGTLR NVPVGGGCRR NKRSSSSFSK NINKPVNFHN DPLHNPFTGM
101: PSSFGYDSID LNLAFAALHK HPPSQVTPSF GFGGDVSIYG NSTNTHSGVL GNGLNFGEQN GNFNGGSLWY ENPSKVLLGF PWQITGNSAG GVPETDPGRE
201: SWNGLVSSWS SGLLNTPLV
101: PSSFGYDSID LNLAFAALHK HPPSQVTPSF GFGGDVSIYG NSTNTHSGVL GNGLNFGEQN GNFNGGSLWY ENPSKVLLGF PWQITGNSAG GVPETDPGRE
201: SWNGLVSSWS SGLLNTPLV
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Arabidopsis Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.