Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50231 | Canola | nucleus | 95.28 | 95.65 |
| AT1G21340.1 | Thale cress | nucleus | 81.5 | 79.62 |
| CDY00373 | Canola | nucleus | 80.31 | 78.46 |
| CDY61064 | Canola | nucleus | 79.53 | 77.39 |
| CDY70840 | Canola | nucleus | 19.29 | 43.36 |
| Solyc04g070960.1.1 | Tomato | nucleus | 31.1 | 29.59 |
| KRH53419 | Soybean | nucleus | 33.46 | 29.41 |
| PGSC0003DMT400002060 | Potato | nucleus | 30.71 | 29.32 |
| CDY53379 | Canola | nucleus | 25.2 | 29.22 |
| CDY29082 | Canola | nucleus | 27.17 | 28.75 |
| CDX90602 | Canola | nucleus | 27.17 | 28.63 |
| KRH64521 | Soybean | nucleus | 32.28 | 28.37 |
| CDX78095 | Canola | nucleus | 26.77 | 28.1 |
| CDY59600 | Canola | nucleus | 26.77 | 27.87 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 30.71 | 27.76 |
| CDX77184 | Canola | nucleus | 25.98 | 25.78 |
| CDX80191 | Canola | nucleus | 24.41 | 24.12 |
| CDY09221 | Canola | nucleus | 24.41 | 24.03 |
| CDY31568 | Canola | nucleus | 24.41 | 24.03 |
| CDY08775 | Canola | nucleus | 18.5 | 23.98 |
| CDX71050 | Canola | nucleus | 23.62 | 23.72 |
| CDY07781 | Canola | nucleus | 19.29 | 22.9 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.05 | 22.4 |
| CDY72657 | Canola | nucleus | 25.59 | 22.26 |
| CDX88742 | Canola | nucleus | 24.02 | 22.02 |
| CDX87189 | Canola | nucleus | 21.26 | 21.6 |
| CDY02191 | Canola | nucleus | 24.41 | 21.09 |
| CDY16836 | Canola | nucleus | 21.65 | 20.6 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 25.2 | 20.25 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 26.38 | 20.24 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 26.38 | 20.24 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 26.38 | 20.24 |
| CDY51722 | Canola | nucleus | 22.05 | 20.14 |
| CDY08392 | Canola | nucleus | 26.77 | 20.12 |
| CDY07156 | Canola | nucleus | 22.05 | 20.07 |
| EES03938 | Sorghum | nucleus | 26.38 | 20.0 |
| Zm00001d042736_P001 | Maize | nucleus | 25.59 | 20.0 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 25.98 | 19.94 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 24.8 | 19.94 |
| CDY42836 | Canola | nucleus | 22.44 | 19.93 |
| CDY40813 | Canola | nucleus | 22.05 | 19.79 |
| CDY03494 | Canola | nucleus | 26.77 | 19.77 |
| Os01t0865800-00 | Rice | nucleus | 25.59 | 19.76 |
| CDY35454 | Canola | nucleus | 26.38 | 19.59 |
| Os05t0440000-00 | Rice | nucleus | 25.2 | 19.57 |
| CDX79743 | Canola | nucleus | 22.44 | 19.45 |
| CDY71684 | Canola | nucleus | 25.59 | 19.4 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 24.8 | 19.27 |
| CDX92613 | Canola | nucleus | 25.98 | 19.24 |
| CDY71763 | Canola | nucleus | 25.98 | 19.24 |
| CDX93365 | Canola | nucleus | 22.83 | 18.77 |
| CDY65260 | Canola | nucleus | 22.83 | 18.77 |
| CDX86775 | Canola | nucleus | 22.83 | 18.65 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 25.2 | 18.6 |
| CDY33948 | Canola | nucleus | 22.05 | 18.54 |
| CDX74947 | Canola | nucleus | 23.23 | 18.15 |
| CDY37834 | Canola | nucleus | 21.65 | 18.09 |
| Zm00001d012280_P001 | Maize | nucleus | 24.02 | 18.05 |
| CDY70312 | Canola | nucleus | 20.08 | 17.96 |
| CDY64622 | Canola | nucleus | 22.83 | 17.96 |
| CDX71704 | Canola | nucleus | 23.62 | 17.91 |
| CDX91370 | Canola | nucleus | 22.83 | 17.85 |
| EES18302 | Sorghum | plastid | 25.59 | 17.76 |
| CDY16754 | Canola | nucleus | 23.62 | 17.65 |
| CDY70838 | Canola | nucleus | 21.26 | 17.65 |
| CDX87270 | Canola | nucleus | 23.62 | 17.6 |
| CDX81292 | Canola | nucleus | 19.29 | 17.38 |
| CDX89134 | Canola | extracellular, vacuole | 23.62 | 17.24 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 25.59 | 17.24 |
| CDY70666 | Canola | nucleus | 20.08 | 17.17 |
| CDY72049 | Canola | nucleus | 20.08 | 17.17 |
| CDY35729 | Canola | nucleus | 20.08 | 17.06 |
| CDX73385 | Canola | nucleus | 20.08 | 16.89 |
| CDY41539 | Canola | nucleus | 24.02 | 16.67 |
| CDY57876 | Canola | nucleus | 23.62 | 16.62 |
| CDX80030 | Canola | nucleus | 23.62 | 16.48 |
| CDX90142 | Canola | nucleus | 20.47 | 16.46 |
| CDY00341 | Canola | nucleus | 23.62 | 16.3 |
| CDX84369 | Canola | nucleus | 23.62 | 16.17 |
| CDY27314 | Canola | nucleus | 22.83 | 16.11 |
| CDX95706 | Canola | nucleus | 23.23 | 15.99 |
| CDY69145 | Canola | nucleus, plastid | 19.68 | 15.87 |
| CDX83357 | Canola | nucleus | 23.23 | 15.78 |
| CDY61727 | Canola | nucleus | 23.23 | 15.78 |
| CDY40358 | Canola | nucleus | 20.08 | 15.32 |
| CDY15678 | Canola | nucleus | 19.68 | 15.29 |
| CDY66590 | Canola | nucleus | 19.68 | 15.29 |
| CDX95139 | Canola | nucleus | 20.08 | 15.18 |
| CDY15624 | Canola | nucleus | 19.68 | 14.97 |
| CDY24798 | Canola | nucleus | 26.38 | 14.79 |
| CDY31735 | Canola | nucleus | 19.68 | 14.53 |
| CDX77212 | Canola | nucleus | 19.29 | 14.41 |
| CDY70704 | Canola | nucleus | 20.47 | 14.25 |
| CDY40213 | Canola | nucleus | 19.68 | 14.08 |
| CDX76102 | Canola | nucleus | 20.47 | 13.65 |
| CDY61965 | Canola | nucleus | 16.54 | 13.5 |
| CDY06274 | Canola | nucleus | 16.54 | 13.38 |
| CDY55422 | Canola | nucleus | 20.87 | 13.22 |
| CDY55549 | Canola | nucleus | 20.87 | 13.18 |
| CDX80822 | Canola | nucleus | 20.87 | 13.05 |
| CDY04855 | Canola | nucleus | 20.47 | 12.81 |
| CDY08776 | Canola | nucleus | 1.57 | 4.65 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078ERV1 | EnsemblPlants:CDY04620 | ProteinID:CDY04620 | ProteinID:CDY04620.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00119192001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI0004EE67A9 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC05g16580D
Coordinates
chrLK031956:+:375499..376263
Molecular Weight (calculated)
28544.7 Da
IEP (calculated)
4.661
GRAVY (calculated)
-0.780
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLPYNAYNS YQHQFPSPEL EIPEKWKVPY GHDETAPPCP RCASSNTKFC YYNNYSLSQP RYFCKGCRRY WTKGGSLRNI PVGGGCRKRS RSRHNSHKRF
101: GQNENLQRDG LINQDDGSQA SHAGSVIDLA AVFAQYVTNG SPSSTDNTTG SDQHSPVTTT TTNHALDSLT WDICQETDVN LGFSGTEKIQ DGFGQFLQED
201: EEEMFEFQGL LDDKEIQEIL DCSFSDEPDQ LISQGSFMIN GDHWSSTDLA TFGI
101: GQNENLQRDG LINQDDGSQA SHAGSVIDLA AVFAQYVTNG SPSSTDNTTG SDQHSPVTTT TTNHALDSLT WDICQETDVN LGFSGTEKIQ DGFGQFLQED
201: EEEMFEFQGL LDDKEIQEIL DCSFSDEPDQ LISQGSFMIN GDHWSSTDLA TFGI
001: MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
101: FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG
201: QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW SSTDLTRFGI
Arabidopsis Description
DOF1.2Dof zinc finger protein DOF1.2 [Source:UniProtKB/Swiss-Prot;Acc:P68349]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.