Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64521 | Soybean | nucleus | 34.88 | 33.91 |
| KRH53419 | Soybean | nucleus | 34.88 | 33.91 |
| PGSC0003DMT400002060 | Potato | nucleus | 30.61 | 32.33 |
| Bra012277.1-P | Field mustard | nucleus | 29.89 | 32.18 |
| CDY61064 | Canola | nucleus | 29.89 | 32.18 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 30.61 | 31.85 |
| Solyc04g070960.1.1 | Tomato | nucleus | 30.25 | 31.84 |
| Bra017906.1-P | Field mustard | nucleus | 28.47 | 31.62 |
| CDY00373 | Canola | nucleus | 29.18 | 31.54 |
| CDY50231 | Canola | nucleus | 28.11 | 31.23 |
| AT1G21340.1 | Thale cress | nucleus | 28.47 | 30.77 |
| CDY04620 | Canola | nucleus | 27.76 | 30.71 |
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 26.33 | 25.78 |
| VIT_02s0025g02250.t01 | Wine grape | nucleus | 25.27 | 24.65 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.71 | 24.4 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 25.62 | 22.78 |
| Os01t0865800-00 | Rice | nucleus | 26.33 | 22.49 |
| Os05t0440000-00 | Rice | nucleus | 25.98 | 22.32 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 25.98 | 22.32 |
| Zm00001d042736_P001 | Maize | nucleus | 25.62 | 22.15 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 24.91 | 22.15 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 24.91 | 22.15 |
| EES03938 | Sorghum | nucleus | 25.62 | 21.49 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 22.42 | 21.28 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 24.91 | 21.15 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 24.91 | 21.15 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 24.91 | 21.15 |
| TraesCS3B01G409600.1 | Wheat | nucleus | 24.91 | 21.15 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 25.62 | 20.93 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 22.78 | 20.78 |
| EES18302 | Sorghum | plastid | 27.05 | 20.77 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 24.56 | 20.47 |
| Zm00001d012280_P001 | Maize | nucleus | 24.2 | 20.12 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 24.2 | 19.71 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 25.98 | 19.36 |
| VIT_10s0003g00030.t01 | Wine grape | nucleus | 20.28 | 19.06 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 20.28 | 18.51 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 20.64 | 18.24 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 21.0 | 17.46 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 19.22 | 16.88 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 17.44 | 16.61 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 18.86 | 15.06 |
Protein Annotations
| EntrezGene:100242094 | wikigene:100242094 | MapMan:15.5.1.5 | ProteinID:CCB46111 | ProteinID:CCB46111.1 | UniProt:F6GZV4 |
| EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EntrezGene:LOC100242094 | wikigene:LOC100242094 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF76 |
| TIGR:TC68429 | UniParc:UPI000198522F | ArrayExpress:VIT_18s0001g15730 | EnsemblPlantsGene:VIT_18s0001g15730 | EnsemblPlants:VIT_18s0001g15730.t01 | unigene:Vvi.5309 |
| RefSeq:XP_002262622 | RefSeq:XP_002262622.1 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:-:13865318..13866466
Molecular Weight (calculated)
30807.9 Da
IEP (calculated)
4.876
GRAVY (calculated)
-0.532
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSTSDHHML HCPPRPLPSL DKGWKSNAEL APSCPRCSSP NTKFCYYNNY SLSQPRYFCK GCRRYWTKGG SLRNVPVGGG CRKNRRGKAV RVPQLERGSG
101: NYGSDAPPSG DSVVVVPPGR TGGAEIDLAV VFAKFLNHNS GFEPEVAGSA LSDQTDAAGN VLGALNSDAQ QEDMAMECGT SLDLMGEVQL LEGHTQLFDG
201: GEKQIQEERI QEFTSHDDAS AYGLPTLLSD EAAQEVLWSD AQTLQNFTWQ PVMQLQEFES VPSYDHSKMS PNLIGEFWSS F
101: NYGSDAPPSG DSVVVVPPGR TGGAEIDLAV VFAKFLNHNS GFEPEVAGSA LSDQTDAAGN VLGALNSDAQ QEDMAMECGT SLDLMGEVQL LEGHTQLFDG
201: GEKQIQEERI QEFTSHDDAS AYGLPTLLSD EAAQEVLWSD AQTLQNFTWQ PVMQLQEFES VPSYDHSKMS PNLIGEFWSS F
001: MHAYIIHSYS DRLKKSERDM ERAEALTSSF IWRPNANANA EITPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG GGCRKSRRPK
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
101: SSSGNNTKTS LTANSGNPGG GSPSIDLALV YANFLNPKPD ESILQENCDL ATTDFLVDNP TGTSMDPSWS MDINDGHHDH YINPVEHIVE ECGYNGLPPF
201: PGEELLSLDT NGVWSDALLI GHNHVDVGVT PVQAVHEPVV HFADESNDST NLLFGSWSPF DFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.