Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 51.27 | 56.45 |
| VIT_02s0025g02250.t01 | Wine grape | nucleus | 50.32 | 55.21 |
| KRH06442 | Soybean | nucleus | 44.94 | 51.45 |
| KRG92523 | Soybean | nucleus | 48.1 | 50.33 |
| PGSC0003DMT400048612 | Potato | nucleus | 42.72 | 49.82 |
| KRH47883 | Soybean | nucleus | 44.62 | 49.13 |
| Solyc10g009360.2.1 | Tomato | nucleus | 40.51 | 49.04 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 24.68 | 48.45 |
| PGSC0003DMT400000349 | Potato | nucleus | 40.19 | 47.92 |
| Solyc01g096120.2.1 | Tomato | nucleus | 40.51 | 46.38 |
| GSMUA_Achr11P... | Banana | nucleus | 41.46 | 44.56 |
| KRH34272 | Soybean | nucleus | 46.2 | 43.45 |
| CDY71684 | Canola | nucleus | 38.92 | 36.72 |
| AT4G24060.1 | Thale cress | nucleus | 39.56 | 36.55 |
| CDY71763 | Canola | nucleus | 39.56 | 36.44 |
| CDY03494 | Canola | nucleus | 39.56 | 36.34 |
| CDX92613 | Canola | nucleus | 39.24 | 36.15 |
| Bra019247.1-P | Field mustard | nucleus | 39.24 | 36.15 |
| CDY72657 | Canola | nucleus | 32.91 | 35.62 |
| Bra013758.1-P | Field mustard | nucleus | 37.66 | 35.42 |
| CDY35454 | Canola | nucleus | 37.66 | 34.8 |
| Bra010548.1-P | Field mustard | nucleus | 37.66 | 33.81 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 32.28 | 33.12 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 24.05 | 29.57 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 25.0 | 29.26 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 26.58 | 28.38 |
| VIT_10s0003g00030.t01 | Wine grape | nucleus | 24.68 | 26.09 |
| CDY24798 | Canola | nucleus | 37.03 | 25.83 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.15 | 24.91 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 24.68 | 24.53 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 25.63 | 24.04 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 23.73 | 23.44 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 25.0 | 22.9 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 19.94 | 21.36 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 20.57 | 21.1 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 21.84 | 19.6 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 20.89 | 19.53 |
Protein Annotations
| EntrezGene:100263781 | wikigene:100263781 | MapMan:15.5.1.5 | UniProt:A5C165 | EMBL:AM478502 | ProteinID:CAN64100 |
| ProteinID:CAN64100.1 | ProteinID:CCB62556 | ProteinID:CCB62556.1 | EMBL:FN596755 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | EntrezGene:LOC100263781 | wikigene:LOC100263781 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | TIGR:TC61022 | TIGR:TC64354 | UniParc:UPI00015220B6 |
| ArrayExpress:VIT_15s0046g00150 | EnsemblPlantsGene:VIT_15s0046g00150 | EnsemblPlants:VIT_15s0046g00150.t01 | unigene:Vvi.11538 | RefSeq:XP_002266221 | RefSeq:XP_002266221.1 |
| RefSeq:XP_003633971 | RefSeq:XP_003633971.1 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr15:-:17188767..17190484
Molecular Weight (calculated)
33993.4 Da
IEP (calculated)
8.566
GRAVY (calculated)
-0.591
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNAQWPQEN SIGEAKDMEE AISISINSDH TCSKPVLERK ARPQKDQAVN CPRCSSTNTK FCYYNNYSLT QPRYFCKTCR RYWTEGGTLR NVPVGGGSRK
101: NKRSITTSSS LSSSLTSSSS FKTHLPDLNP PILSHFSSEN PRIHEPHDLN LAFPLPQYYH GISQFAEVPK IENNNCSSSS SSSSSSTLSH LSALELLKTG
201: ITSRGLSSFV PAPMPDSSST LFTSGFPLQE FKVPHLSFSA HLHGVDPQQN MSTTGRVLFP FGEVKQLPAT TSTGVDHDCS GNNKGQGSPA TAAYWNNGMF
301: GGGGGRGGGG GGGGSW
101: NKRSITTSSS LSSSLTSSSS FKTHLPDLNP PILSHFSSEN PRIHEPHDLN LAFPLPQYYH GISQFAEVPK IENNNCSSSS SSSSSSTLSH LSALELLKTG
201: ITSRGLSSFV PAPMPDSSST LFTSGFPLQE FKVPHLSFSA HLHGVDPQQN MSTTGRVLFP FGEVKQLPAT TSTGVDHDCS GNNKGQGSPA TAAYWNNGMF
301: GGGGGRGGGG GGGGSW
001: MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT METRKARPQE KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.