Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g096120.2.1 | Tomato | nucleus | 90.94 | 87.32 |
| PGSC0003DMT400048612 | Potato | nucleus | 57.74 | 56.46 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 47.92 | 40.19 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 23.77 | 39.13 |
| PGSC0003DMT400031928 | Potato | nucleus | 48.3 | 38.55 |
| PGSC0003DMT400047705 | Potato | nucleus | 37.74 | 38.31 |
| GSMUA_Achr11P... | Banana | nucleus | 37.74 | 34.01 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 26.79 | 27.63 |
| PGSC0003DMT400065271 | Potato | nucleus | 29.43 | 26.09 |
| PGSC0003DMT400019416 | Potato | nucleus | 28.68 | 25.17 |
| PGSC0003DMT400069680 | Potato | nucleus | 25.28 | 23.93 |
| PGSC0003DMT400033382 | Potato | nucleus | 22.64 | 23.26 |
| PGSC0003DMT400058729 | Potato | nucleus | 16.98 | 22.84 |
| PGSC0003DMT400076397 | Potato | nucleus | 24.15 | 22.46 |
| PGSC0003DMT400075051 | Potato | nucleus | 24.15 | 21.99 |
| PGSC0003DMT400046598 | Potato | nucleus | 26.79 | 21.52 |
| PGSC0003DMT400002060 | Potato | nucleus | 21.13 | 21.05 |
| PGSC0003DMT400010397 | Potato | nucleus | 24.91 | 20.69 |
| PGSC0003DMT400025984 | Potato | nucleus | 21.13 | 20.0 |
| PGSC0003DMT400001174 | Potato | nucleus | 19.25 | 19.92 |
| PGSC0003DMT400055052 | Potato | nucleus | 22.64 | 19.17 |
| PGSC0003DMT400057782 | Potato | mitochondrion | 20.38 | 19.15 |
| PGSC0003DMT400078164 | Potato | nucleus | 23.02 | 19.06 |
| PGSC0003DMT400076447 | Potato | nucleus | 27.92 | 18.59 |
| PGSC0003DMT400060216 | Potato | nucleus | 20.38 | 17.88 |
| PGSC0003DMT400041580 | Potato | nucleus | 24.91 | 17.46 |
| PGSC0003DMT400049288 | Potato | nucleus | 21.89 | 15.51 |
| PGSC0003DMT400023033 | Potato | nucleus | 22.26 | 14.64 |
Protein Annotations
| EntrezGene:102588406 | MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:M0ZGK7 |
| PFAM:PD007478 | PFAM:PF02701 | EnsemblPlantsGene:PGSC0003DMG400000120 | PGSC:PGSC0003DMG400000120 | EnsemblPlants:PGSC0003DMT400000349 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF42 | UniParc:UPI0002953989 | RefSeq:XP_015167887.1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
Dof18 [Source:PGSC_GENE;Acc:PGSC0003DMG400000120]
Coordinates
chr1:+:73702490..73704280
Molecular Weight (calculated)
28730.6 Da
IEP (calculated)
9.730
GRAVY (calculated)
-0.622
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTAEIMNKK VRPVKDGAIN CPRCNSLNTK FCYYNNYSLT QPRYFCKTCR RYWTEGGTLR NVPVGGGSRK NKRLSSSSQK LPDLNPNPTS HVPAHHQSPN
101: NIVIGSNQDL TLGFRTVPQD HHTSFHGVIP QFLELPKMDG SNNHLGSSSQ ISALELLRTG IASRGFTSFI SSASTPDLNA LYNNSGFPFQ ELKPDHAASL
201: SNNYSSGGPG GLENGSGARI MFPLGGLKQL SSTNQVDHQT KGHENNNSTA GLYWNGMLSG TGGSW
101: NIVIGSNQDL TLGFRTVPQD HHTSFHGVIP QFLELPKMDG SNNHLGSSSQ ISALELLRTG IASRGFTSFI SSASTPDLNA LYNNSGFPFQ ELKPDHAASL
201: SNNYSSGGPG GLENGSGARI MFPLGGLKQL SSTNQVDHQT KGHENNNSTA GLYWNGMLSG TGGSW
001: MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT METRKARPQE KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.