Factsheet for PGSC0003DMT400033382

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047705	Potato	nucleus	24.81	24.52
PGSC0003DMT400058729	Potato	nucleus	18.22	23.86
PGSC0003DMT400048612	Potato	nucleus	24.81	23.62
PGSC0003DMT400000349	Potato	nucleus	23.26	22.64
PGSC0003DMT400076397	Potato	nucleus	24.81	22.46
PGSC0003DMT400019416	Potato	nucleus	24.81	21.19
PGSC0003DMT400001174	Potato	nucleus	20.93	21.09
PGSC0003DMT400069680	Potato	nucleus	22.87	21.07
PGSC0003DMT400078164	Potato	nucleus	25.97	20.94
PGSC0003DMT400076447	Potato	nucleus	31.78	20.6
PGSC0003DMT400060216	Potato	nucleus	24.03	20.53
PGSC0003DMT400031928	Potato	nucleus	26.36	20.48
PGSC0003DMT400065271	Potato	nucleus	23.64	20.4
PGSC0003DMT400010397	Potato	nucleus	24.03	19.44
PGSC0003DMT400025984	Potato	nucleus	20.93	19.29
PGSC0003DMT400023033	Potato	nucleus	29.46	18.86
PGSC0003DMT400002060	Potato	nucleus	18.99	18.42
PGSC0003DMT400075051	Potato	nucleus	20.54	18.21
PGSC0003DMT400046598	Potato	nucleus	23.26	18.18
PGSC0003DMT400057782	Potato	mitochondrion	19.77	18.09
PGSC0003DMT400049288	Potato	nucleus	25.58	17.65
PGSC0003DMT400041580	Potato	nucleus	25.19	17.2
PGSC0003DMT400055052	Potato	nucleus	19.38	15.97

Protein Annotations

EntrezGene:102598246	MapMan:15.5.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	UniProt:M1AZ23
PFAM:PD007478	PFAM:PF02701	EnsemblPlantsGene:PGSC0003DMG400012825	PGSC:PGSC0003DMG400012825	EnsemblPlants:PGSC0003DMT400033382	ScanProsite:PS01361
PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF79	UniParc:UPI000296C5E0	RefSeq:XP_015162392.1	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

DOF zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012825]

Coordinates

chr3:+:1820259..1821142

Molecular Weight (calculated)

29356.1 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.741

Length

258 amino acids

Sequence
(BLAST)

001: MLGESDEKNM KSNFMIMEKQ NIQDQPQQQP QQQQTLKCPR CDSSNTKFCY YNNYSLSQPR HFCKSCKRYW TRGGTLRHVP LGGSSRKNKN IQKPNFVTSS
101: TNLGPNFHEP QVVVDHTNPL FNYGLSTNPF DPNIQFPRLF NFSRVFNNEN LGLGFSNEFK KIQDIVTSTN NSSSSLLSSY PTFGSSLISS SSSNLTSLIA
201: PTLHQQNFIT NNDKFQDSNY HELNQIEEMN YVNNPFLSWA SDYVDPSNLG SSSLPSLI

Best Arabidopsis Sequence Match ( AT1G28310.1 )
(BLAST)

001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I

Arabidopsis Description

Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.