Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 52.66 | 52.83 |
| KRH03180 | Soybean | nucleus | 47.34 | 50.33 |
| KRH56758 | Soybean | nucleus | 44.51 | 48.63 |
| CDY40813 | Canola | nucleus | 40.44 | 45.58 |
| KRH54755 | Soybean | nucleus | 43.26 | 45.54 |
| Bra029352.1-P | Field mustard | nucleus | 39.19 | 44.96 |
| Bra035956.1-P | Field mustard | nucleus | 37.62 | 44.94 |
| CDY16836 | Canola | nucleus | 37.62 | 44.94 |
| CDX87189 | Canola | nucleus | 35.11 | 44.8 |
| CDY42836 | Canola | nucleus | 40.13 | 44.76 |
| AT5G60850.1 | Thale cress | nucleus | 42.95 | 44.63 |
| CDY02191 | Canola | nucleus | 41.07 | 44.56 |
| Bra013003.1-P | Field mustard | nucleus | 40.75 | 44.22 |
| KRH63162 | Soybean | nucleus | 42.95 | 40.18 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 19.44 | 31.79 |
| Zm00001d051700_P001 | Maize | mitochondrion | 23.2 | 29.25 |
| PGSC0003DMT400047705 | Potato | nucleus | 23.2 | 28.35 |
| PGSC0003DMT400058729 | Potato | nucleus | 16.61 | 26.9 |
| Os02t0726300-01 | Rice | nucleus | 23.2 | 26.24 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 23.51 | 25.86 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 19.12 | 25.74 |
| Zm00001d017900_P001 | Maize | nucleus | 24.14 | 25.67 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 23.2 | 25.61 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 23.2 | 25.43 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 22.57 | 25.35 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 22.57 | 25.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.94 | 25.09 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 22.26 | 25.0 |
| PGSC0003DMT400069680 | Potato | nucleus | 21.94 | 25.0 |
| PGSC0003DMT400000349 | Potato | nucleus | 20.69 | 24.91 |
| PGSC0003DMT400048612 | Potato | nucleus | 21.0 | 24.72 |
| Os06t0284500-00 | Rice | nucleus | 22.26 | 24.57 |
| KXG30845 | Sorghum | nucleus | 23.2 | 24.34 |
| PGSC0003DMT400033382 | Potato | nucleus | 19.44 | 24.03 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.75 | 23.68 |
| PGSC0003DMT400019416 | Potato | nucleus | 21.94 | 23.18 |
| PGSC0003DMT400025984 | Potato | nucleus | 20.06 | 22.86 |
| PGSC0003DMT400076397 | Potato | nucleus | 20.38 | 22.81 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 22.57 | 22.57 |
| PGSC0003DMT400065271 | Potato | nucleus | 21.0 | 22.41 |
| PGSC0003DMT400060216 | Potato | nucleus | 21.0 | 22.19 |
| PGSC0003DMT400057782 | Potato | mitochondrion | 19.44 | 21.99 |
| PGSC0003DMT400001174 | Potato | nucleus | 17.55 | 21.88 |
| PGSC0003DMT400078164 | Potato | nucleus | 21.94 | 21.88 |
| PGSC0003DMT400046598 | Potato | nucleus | 22.26 | 21.52 |
| PGSC0003DMT400075051 | Potato | nucleus | 19.12 | 20.96 |
| PGSC0003DMT400049288 | Potato | nucleus | 24.14 | 20.59 |
| PGSC0003DMT400023033 | Potato | nucleus | 25.39 | 20.1 |
| PGSC0003DMT400031928 | Potato | nucleus | 20.69 | 19.88 |
| PGSC0003DMT400055052 | Potato | nucleus | 18.18 | 18.53 |
| PGSC0003DMT400041580 | Potato | nucleus | 21.32 | 17.99 |
| PGSC0003DMT400076447 | Potato | nucleus | 20.06 | 16.08 |
Protein Annotations
| EntrezGene:107061959 | MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0044212 | InterPro:IPR003851 |
| UniProt:M0ZXZ2 | PFAM:PD007478 | PFAM:PF02701 | EnsemblPlantsGene:PGSC0003DMG400004062 | PGSC:PGSC0003DMG400004062 | EnsemblPlants:PGSC0003DMT400010397 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF71 | UniParc:UPI00029533F5 | RefSeq:XP_015167508.1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
DOF domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400004062]
Coordinates
chr6:+:51165871..51167313
Molecular Weight (calculated)
34903.6 Da
IEP (calculated)
5.321
GRAVY (calculated)
-0.858
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDIHSIGGG GGRFFGGGGD RRLRPNNHQN HQALKCPRCD SLNTKFCYYN NYNLSQPRHF CKSCRRYWTK GGVLRNVPVG GGCRKSKRSK PKSTTADDAP
101: EEHKSDTNSS SESSSLTATT TAAAAATANT SGAATTEDVS ATSSYSASTY LNFPESNFFI PHGTNQTFDD QPLMENSVED QFQDIGNFTS MITSSNDPFN
201: MVDIPVYRLP ENQNSNEQWN TETKMVGTLP TSGEMKMEQM STGFSNQTGL VDEYPGLQHQ SRLNNSSELA SLNWQTGGAV DGGGGGDHGF YDLTGTVDHQ
301: SYWSQTQWGE NDNSLNFLP
101: EEHKSDTNSS SESSSLTATT TAAAAATANT SGAATTEDVS ATSSYSASTY LNFPESNFFI PHGTNQTFDD QPLMENSVED QFQDIGNFTS MITSSNDPFN
201: MVDIPVYRLP ENQNSNEQWN TETKMVGTLP TSGEMKMEQM STGFSNQTGL VDEYPGLQHQ SRLNNSSELA SLNWQTGGAV DGGGGGDHGF YDLTGTVDHQ
301: SYWSQTQWGE NDNSLNFLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.