Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G213400.1 | Wheat | nucleus | 59.86 | 60.92 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 59.86 | 60.92 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 59.52 | 60.56 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 58.48 | 52.98 |
| Os02t0726300-01 | Rice | nucleus | 47.4 | 48.58 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 25.95 | 31.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.95 | 26.88 |
| CDX87189 | Canola | nucleus | 21.45 | 24.8 |
| Os03t0764900-01 | Rice | nucleus | 30.45 | 24.51 |
| CDY40813 | Canola | nucleus | 23.88 | 24.38 |
| CDY42836 | Canola | nucleus | 23.88 | 24.13 |
| KRH56758 | Soybean | nucleus | 24.22 | 23.97 |
| CDY16836 | Canola | nucleus | 22.15 | 23.97 |
| Bra035956.1-P | Field mustard | nucleus | 22.15 | 23.97 |
| AT5G60850.1 | Thale cress | nucleus | 25.26 | 23.78 |
| Bra029352.1-P | Field mustard | nucleus | 22.84 | 23.74 |
| CDY02191 | Canola | nucleus | 23.88 | 23.47 |
| KRH03180 | Soybean | nucleus | 24.22 | 23.33 |
| Bra013003.1-P | Field mustard | nucleus | 23.53 | 23.13 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 24.91 | 22.64 |
| KRH54755 | Soybean | nucleus | 23.53 | 22.44 |
| PGSC0003DMT400010397 | Potato | nucleus | 24.57 | 22.26 |
| Os02t0707200-00 | Rice | nucleus | 21.8 | 21.88 |
| KRH63162 | Soybean | nucleus | 24.57 | 20.82 |
| Os05t0112200-01 | Rice | nucleus | 20.76 | 20.69 |
| Os12t0569900-01 | Rice | nucleus | 23.18 | 19.25 |
| Os02t0673700-01 | Rice | nucleus | 24.91 | 18.9 |
| Os04t0567800-01 | Rice | nucleus | 23.53 | 18.73 |
| Os01t0865800-00 | Rice | nucleus | 21.11 | 18.54 |
| Os07t0236700-01 | Rice | nucleus | 22.49 | 18.41 |
| Os05t0440000-00 | Rice | nucleus | 20.07 | 17.74 |
| Os03t0821200-00 | Rice | nucleus | 23.88 | 16.67 |
| Os02t0252400-01 | Rice | nucleus | 21.11 | 16.35 |
| Os07t0508900-00 | Rice | cytosol | 2.08 | 15.0 |
| Os03t0276300-00 | Rice | cytosol | 3.46 | 7.19 |
| Os07t0508700-00 | Rice | cytosol | 2.08 | 5.77 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:4340769 | ProteinID:BAD69018.1 | ProteinID:BAF19314.1 | ProteinID:BAS97263.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003851 | EnsemblPlantsGene:Os06g0284500 | EnsemblPlants:Os06t0284500-00 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | UniProt:Q5VNE4 | UniParc:UPI000045801C |
| RefSeq:XP_015641761.1 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
DNA BINDING WITH ONE FINGER 20Zinc finger, Dof-type family protein. (Os06t0284500-00)
Coordinates
chr6:+:10101308..10102349
Molecular Weight (calculated)
28834.2 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.200
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEFHPVPGL AGRLFGGAAA AAAVAAVEEV RCPRCDSSNT KFCYYNNYNL SQPRHFCKAC RRYWTKGGLL RNVPVGGGCR KPKRPAPPPS SSFTGGGGGG
101: GGCGHRDSKS ARSAGGGGDG SGSTASATAT PAAAPASSNT LSAAVSQPSS VDALSPPPAP MFADQATAFA SLFAPPPPPP SQALPAFASF TAQPKAEEDV
201: ADAPALAATE QHRSSSAASF AAHSISPPFA AARSSDGPAA AAAAAAADWA PPTAVLDAGM FDLAGAIGGD TSYWNAASWT DHDGTIYLP
101: GGCGHRDSKS ARSAGGGGDG SGSTASATAT PAAAPASSNT LSAAVSQPSS VDALSPPPAP MFADQATAFA SLFAPPPPPP SQALPAFASF TAQPKAEEDV
201: ADAPALAATE QHRSSSAASF AAHSISPPFA AARSSDGPAA AAAAAAADWA PPTAVLDAGM FDLAGAIGGD TSYWNAASWT DHDGTIYLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.