Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0673700-01 | Rice | nucleus | 65.01 | 61.94 |
| Zm00001d051439_P001 | Maize | nucleus | 60.33 | 59.67 |
| KRG97209 | Soybean | nucleus | 32.78 | 47.22 |
| KRH68931 | Soybean | nucleus | 33.61 | 41.64 |
| AT3G61850.4 | Thale cress | nucleus | 33.61 | 37.65 |
| Bra014418.1-P | Field mustard | nucleus | 30.85 | 36.13 |
| CDX86775 | Canola | nucleus | 30.85 | 36.01 |
| CDX71704 | Canola | nucleus | 32.78 | 35.52 |
| Bra004525.1-P | Field mustard | nucleus | 33.88 | 34.94 |
| AT2G46590.2 | Thale cress | nucleus | 34.99 | 34.42 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 33.88 | 34.17 |
| CDY64622 | Canola | nucleus | 30.3 | 34.06 |
| CDY27314 | Canola | nucleus | 33.61 | 33.89 |
| CDX80030 | Canola | nucleus | 33.88 | 33.79 |
| CDY41539 | Canola | nucleus | 33.88 | 33.61 |
| CDY57876 | Canola | nucleus | 33.33 | 33.52 |
| Bra000429.1-P | Field mustard | nucleus | 33.61 | 33.06 |
| CDX95706 | Canola | nucleus | 33.61 | 33.06 |
| CDY61727 | Canola | nucleus | 33.88 | 32.89 |
| CDX83357 | Canola | nucleus | 33.61 | 32.62 |
| CDX89134 | Canola | extracellular, vacuole | 30.58 | 31.9 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 37.74 | 31.71 |
| Os02t0707200-00 | Rice | nucleus | 23.69 | 29.86 |
| Os02t0252400-01 | Rice | nucleus | 28.37 | 27.61 |
| Os02t0726300-01 | Rice | nucleus | 19.83 | 25.53 |
| Os05t0440000-00 | Rice | nucleus | 22.86 | 25.38 |
| Os01t0865800-00 | Rice | nucleus | 22.86 | 25.23 |
| Os12t0569900-01 | Rice | nucleus | 23.42 | 24.43 |
| Os06t0284500-00 | Rice | nucleus | 18.73 | 23.53 |
| Os07t0236700-01 | Rice | nucleus | 22.86 | 23.51 |
| Os05t0112200-01 | Rice | nucleus | 18.46 | 23.1 |
| Os03t0821200-00 | Rice | nucleus | 25.07 | 21.98 |
| Os03t0764900-01 | Rice | nucleus | 19.01 | 19.22 |
| Os07t0508900-00 | Rice | cytosol | 1.65 | 15.0 |
| Os03t0276300-00 | Rice | cytosol | 3.58 | 9.35 |
| Os07t0508700-00 | Rice | cytosol | 1.65 | 5.77 |
Protein Annotations
| MapMan:15.5.1.5 | ProteinID:BAS90544.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 |
| InterPro:IPR003851 | EnsemblPlantsGene:Os04g0567800 | EnsemblPlants:Os04t0567800-01 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | UniParc:UPI0001C7E45B | RefSeq:XP_015637009.1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
DNA BINDING WITH ONE FINGER 18Similar to OSIGBa0103M18.3 protein. (Os04t0567800-01)
Coordinates
chr4:-:28534919..28536474
Molecular Weight (calculated)
35959.9 Da
IEP (calculated)
8.671
GRAVY (calculated)
-0.393
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMLMAANA AAGANPNPAA TAPSSVTGGA LRGGGGGGAP PVAGGAGAGS TERRARPQKE KALNCPRCNS TNTKFCYYNN YSLQQPRYFC KTCRRYWTEG
101: GSLRNVPVGG GSRKNKRSSS SAASASPASA STANSVVTSA SMSMSMASTG GGASKNPKLV HEGAQDLNLA FPHHGGLQAP GEFPAFPSLE SSSVCNPGGP
201: MGTNGRGGGA LSAMELLRST GCYMPLQVPM QMPAEYATPG FALGEFRAPP PPPQSSQSLL GFSLDAHGSV GGPSAAGFGS SAGLQGVPES TGRLLFPFED
301: LKPTVSSGTG GGGASGGGAG VDGGHQFDHG KEQQAGGGGG GPGGHDTPGF WNGMIGGGSG TSW
101: GSLRNVPVGG GSRKNKRSSS SAASASPASA STANSVVTSA SMSMSMASTG GGASKNPKLV HEGAQDLNLA FPHHGGLQAP GEFPAFPSLE SSSVCNPGGP
201: MGTNGRGGGA LSAMELLRST GCYMPLQVPM QMPAEYATPG FALGEFRAPP PPPQSSQSLL GFSLDAHGSV GGPSAAGFGS SAGLQGVPES TGRLLFPFED
301: LKPTVSSGTG GGGASGGGAG VDGGHQFDHG KEQQAGGGGG GPGGHDTPGF WNGMIGGGSG TSW
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.