Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051700_P001 | Maize | mitochondrion | 64.18 | 71.54 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 72.34 | 70.1 |
| Zm00001d017900_P001 | Maize | nucleus | 74.47 | 70.0 |
| KXG30845 | Sorghum | nucleus | 75.18 | 69.74 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 71.28 | 69.55 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 70.92 | 68.97 |
| Os06t0284500-00 | Rice | nucleus | 48.58 | 47.4 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 23.4 | 33.85 |
| CDX87189 | Canola | nucleus | 24.11 | 27.2 |
| Bra035956.1-P | Field mustard | nucleus | 24.82 | 26.22 |
| CDY16836 | Canola | nucleus | 24.82 | 26.22 |
| CDY40813 | Canola | nucleus | 26.24 | 26.15 |
| CDY42836 | Canola | nucleus | 25.89 | 25.52 |
| Bra013003.1-P | Field mustard | nucleus | 26.6 | 25.51 |
| CDY02191 | Canola | nucleus | 26.6 | 25.51 |
| KRH56758 | Soybean | nucleus | 26.24 | 25.34 |
| Bra029352.1-P | Field mustard | nucleus | 24.82 | 25.18 |
| Os03t0764900-01 | Rice | nucleus | 31.56 | 24.79 |
| AT5G60850.1 | Thale cress | nucleus | 26.95 | 24.76 |
| KRH03180 | Soybean | nucleus | 25.89 | 24.33 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 27.3 | 24.21 |
| Os05t0112200-01 | Rice | nucleus | 24.11 | 23.45 |
| KRH54755 | Soybean | nucleus | 25.18 | 23.43 |
| PGSC0003DMT400010397 | Potato | nucleus | 26.24 | 23.2 |
| Os02t0707200-00 | Rice | nucleus | 23.4 | 22.92 |
| KRH63162 | Soybean | nucleus | 25.18 | 20.82 |
| Os01t0865800-00 | Rice | nucleus | 23.76 | 20.36 |
| Os05t0440000-00 | Rice | nucleus | 23.05 | 19.88 |
| Os04t0567800-01 | Rice | nucleus | 25.53 | 19.83 |
| Os12t0569900-01 | Rice | nucleus | 24.47 | 19.83 |
| Os02t0673700-01 | Rice | nucleus | 26.24 | 19.42 |
| Os07t0236700-01 | Rice | nucleus | 24.11 | 19.26 |
| Os03t0821200-00 | Rice | nucleus | 25.89 | 17.63 |
| Os07t0508900-00 | Rice | cytosol | 2.48 | 17.5 |
| Os02t0252400-01 | Rice | nucleus | 22.34 | 16.89 |
| Os03t0276300-00 | Rice | cytosol | 2.48 | 5.04 |
| Os07t0508700-00 | Rice | cytosol | 0.35 | 0.96 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:4330589 | EMBL:AB028132 | EMBL:AK061000 | EMBL:AK101321 | ProteinID:BAD16079.1 |
| ProteinID:BAF09903.1 | ProteinID:BAS80698.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 |
| EMBL:GQ183532 | InterPro:IPR003851 | EnsemblPlantsGene:Os02g0726300 | EnsemblPlants:Os02t0726300-01 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | UniProt:Q6Z345 | UniParc:UPI00000A769F |
| RefSeq:XP_015623188.1 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
DNA BINDING WITH ONE FINGER 4Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os02t0726300-01);Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os02t0726300-03)
Coordinates
chr2:-:30206964..30208303
Molecular Weight (calculated)
28963.7 Da
IEP (calculated)
8.931
GRAVY (calculated)
-0.302
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEFQSIPGL AGRLFGGAAA ADIRRAQAQQ GPASRCGGIP SPEAVKCPRC ESTNTKFCYY NNYNLSQPRH FCKSCRRYWT KGGVLRNVPV GGGCRKTKRS
101: GSSSAASSAP STPTAATDNA KNQRRASASS PRSSSGGSGN TSPTAAAATT PTTPATPSSN TIAVINHATT TTTTTNPFPT DVPPPAPIFA DQAAALASLF
201: APPPPPPLPV FSFAAQAKTE DGIASVLLAG QTTAPTAATV ADMTPFTSLD AGIFELGDVP PAAYWNAGSC WTDVPDPNVY LP
101: GSSSAASSAP STPTAATDNA KNQRRASASS PRSSSGGSGN TSPTAAAATT PTTPATPSSN TIAVINHATT TTTTTNPFPT DVPPPAPIFA DQAAALASLF
201: APPPPPPLPV FSFAAQAKTE DGIASVLLAG QTTAPTAATV ADMTPFTSLD AGIFELGDVP PAAYWNAGSC WTDVPDPNVY LP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.