Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051700_P001 | Maize | mitochondrion | 63.0 | 74.7 |
| Os02t0726300-01 | Rice | nucleus | 70.0 | 74.47 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 65.33 | 67.35 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 65.0 | 67.24 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 64.67 | 67.13 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 22.0 | 33.85 |
| CDX87189 | Canola | nucleus | 22.67 | 27.2 |
| Zm00001d034653_P001 | Maize | nucleus | 20.0 | 26.79 |
| Bra013003.1-P | Field mustard | nucleus | 25.33 | 25.85 |
| CDY02191 | Canola | nucleus | 25.33 | 25.85 |
| CDY16836 | Canola | nucleus | 23.0 | 25.84 |
| Bra035956.1-P | Field mustard | nucleus | 23.0 | 25.84 |
| CDY40813 | Canola | nucleus | 24.0 | 25.44 |
| Bra029352.1-P | Field mustard | nucleus | 23.33 | 25.18 |
| CDY42836 | Canola | nucleus | 24.0 | 25.17 |
| KRH56758 | Soybean | nucleus | 24.33 | 25.0 |
| AT5G60850.1 | Thale cress | nucleus | 25.33 | 24.76 |
| Zm00001d034163_P001 | Maize | nucleus | 29.33 | 24.38 |
| KRH03180 | Soybean | nucleus | 24.33 | 24.33 |
| PGSC0003DMT400010397 | Potato | nucleus | 25.67 | 24.14 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 29.67 | 24.12 |
| Zm00001d013783_P001 | Maize | nucleus | 23.0 | 23.71 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 25.0 | 23.58 |
| KRH54755 | Soybean | nucleus | 23.67 | 23.43 |
| Zm00001d017788_P001 | Maize | nucleus | 21.67 | 22.57 |
| Zm00001d051577_P001 | Maize | nucleus | 21.67 | 21.89 |
| Zm00001d029512_P001 | Maize | nucleus | 24.67 | 21.08 |
| Zm00001d030727_P002 | Maize | nucleus | 23.67 | 20.82 |
| KRH63162 | Soybean | nucleus | 23.33 | 20.53 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 24.33 | 20.51 |
| Zm00001d017575_P001 | Maize | nucleus | 25.33 | 20.32 |
| Zm00001d041549_P001 | Maize | nucleus | 23.0 | 20.12 |
| Zm00001d033093_P001 | Maize | nucleus | 24.0 | 20.0 |
| Zm00001d028625_P002 | Maize | nucleus | 25.67 | 19.9 |
| Zm00001d051439_P001 | Maize | nucleus | 24.0 | 19.62 |
| Zm00001d047802_P001 | Maize | nucleus | 25.33 | 19.59 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 21.33 | 19.57 |
| Zm00001d011058_P001 | Maize | nucleus | 22.0 | 19.53 |
| Zm00001d042736_P001 | Maize | nucleus | 21.0 | 19.38 |
| Zm00001d035651_P001 | Maize | nucleus | 23.0 | 18.9 |
| Zm00001d021591_P001 | Maize | nucleus | 22.67 | 18.89 |
| Zm00001d006463_P001 | Maize | plastid | 22.0 | 18.8 |
| Zm00001d034651_P002 | Maize | nucleus | 24.33 | 17.68 |
| Zm00001d012280_P001 | Maize | nucleus | 19.67 | 17.46 |
| Zm00001d002642_P001 | Maize | nucleus | 24.33 | 15.24 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 24.33 | 11.62 |
Protein Annotations
| EntrezGene:103627668 | MapMan:15.5.1.5 | UniProt:A0A060D249 | ProteinID:AIB05532.1 | ProteinID:AQK74483.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF40 | UniParc:UPI0001D83EBF | EnsemblPlantsGene:Zm00001d017900 | EnsemblPlants:Zm00001d017900_P001 | EnsemblPlants:Zm00001d017900_T001 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
C2C2-Dof-transcription factor 42Dof zinc finger protein DOF5.4
Coordinates
chr5:-:209782489..209783391
Molecular Weight (calculated)
30316.9 Da
IEP (calculated)
8.210
GRAVY (calculated)
-0.298
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEFQSIPGL AGRLFGGAAA PGDLRRAQAA QHGPGGARCG GASPAAPEAV KCPRCESTNT KFCYYNNYNL SQPRHFCKSC RRYWTKGGVL RNVPVGGGCR
101: KAKRASPSAS ASASSPASSS APSTPASADA AKNPRRASAS PRSNSGSASP TAAAATTPTP TDPSTSATPS SNGVAFTGSH HSSNPFSTID VAAAPPAPIF
201: ADQAAALASL FAPPPPPPLP VFSFAAAQPK EEEAPTNSEL QQHLAAQAAP SSSVSEDIMA PFASLDAAGI FELGDAASAA AYWSAGSCWA DVQDPSLYLP
101: KAKRASPSAS ASASSPASSS APSTPASADA AKNPRRASAS PRSNSGSASP TAAAATTPTP TDPSTSATPS SNGVAFTGSH HSSNPFSTID VAAAPPAPIF
201: ADQAAALASL FAPPPPPPLP VFSFAAAQPK EEEAPTNSEL QQHLAAQAAP SSSVSEDIMA PFASLDAAGI FELGDAASAA AYWSAGSCWA DVQDPSLYLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.