Factsheet for Zm00001d047802_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028625_P002	Maize	nucleus	81.44	81.65
Zm00001d034653_P001	Maize	nucleus	24.74	42.86
Zm00001d034651_P002	Maize	nucleus	39.18	36.8
KRH01640	Soybean	nucleus	31.44	33.61
Zm00001d030727_P002	Maize	nucleus	28.87	32.84
Zm00001d041549_P001	Maize	nucleus	28.61	32.36
Zm00001d035651_P001	Maize	nucleus	28.35	30.14
Zm00001d011058_P001	Maize	nucleus	25.77	29.59
Zm00001d017788_P001	Maize	nucleus	20.1	27.08
Zm00001d051700_P001	Maize	mitochondrion	17.53	26.88
Zm00001d051577_P001	Maize	nucleus	19.85	25.93
Zm00001d051439_P001	Maize	nucleus	23.97	25.34
Zm00001d017900_P001	Maize	nucleus	19.59	25.33
Zm00001d013783_P001	Maize	nucleus	18.3	24.4
Zm00001d017575_P001	Maize	nucleus	23.2	24.06
Zm00001d021591_P001	Maize	nucleus	21.91	23.61
Zm00001d012963_P001	Maize	plastid, vacuole	38.14	23.57
Zm00001d033093_P001	Maize	nucleus	21.65	23.33
Zm00001d029512_P001	Maize	nucleus	20.88	23.08
Zm00001d026096_P001	Maize	nucleus, plastid	21.13	23.03
Zm00001d006463_P001	Maize	plastid	20.36	22.51
Zm00001d038281_P001	Maize	mitochondrion, nucleus	18.3	21.71
Zm00001d042736_P001	Maize	nucleus	17.78	21.23
Zm00001d012280_P001	Maize	nucleus	18.04	20.71
Zm00001d002642_P001	Maize	nucleus	22.68	18.37
Zm00001d013200_P001	Maize	nucleus, plastid	16.49	17.34
Zm00001d034163_P001	Maize	nucleus	15.98	17.17

Protein Annotations

EntrezGene:100273654	MapMan:15.5.1.5	ProteinID:AQL07646.1	UniProt:B4FWT7	EMBL:BT041575	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF65	UniParc:UPI00017B81C9	EnsemblPlantsGene:Zm00001d047802	EnsemblPlants:Zm00001d047802_P001	EnsemblPlants:Zm00001d047802_T001
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

Dof zinc finger protein DOF2.2

Coordinates

chr9:+:142157579..142159500

Molecular Weight (calculated)

40051.8 Da

IEP (calculated)

9.825

GRAVY (calculated)

-0.460

Length

388 amino acids

Sequence
(BLAST)

001: MVFPSVPVYL DPHPPDWNNQ QQQGQQPRAS GGADAPLLPV GPMAATAAAS EPGGLPRSSS TSSAALAMHA RPNSMAERAR LARLPNPEPA LKCPRCESTN
101: TKFCYYNNYS LSQPRHFCKT CRRYWTRGGS LRNVPIGGGC RRNKRSSKSS AAGSSSSSKP FSSGRLLGGP SAMSSTTQGA TGAIIAPGLS SFSHHLPFLG
201: SMHPPGPNLG LGFSVGLPLL GMQHLEMVDQ FPVASGGGTT IGASLEQWRV QQQQQQQFPF MTRGILDLPQ PSTYQLGLEA SRGGSGSDAV AFTLGQSTTS
301: AATITTRQEG SAMKMGDDSK GQDASLQKQY TAALHHGSGS HGVWDGNAGG SGSGGGGGTG SGNSSWPMNI VSAFHSSSTS GGNGDGLS

Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.