Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18302 | Sorghum | plastid | 83.18 | 74.32 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 59.33 | 61.39 |
| TraesCS1B01G284300.1 | Wheat | nucleus | 59.02 | 61.08 |
| Os05t0440000-00 | Rice | nucleus | 59.94 | 59.94 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 56.57 | 53.78 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 59.63 | 51.72 |
| Zm00001d042736_P001 | Maize | nucleus | 50.46 | 50.77 |
| Zm00001d012280_P001 | Maize | nucleus | 48.62 | 47.04 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.41 | 28.0 |
| Zm00001d034653_P001 | Maize | nucleus | 18.04 | 26.34 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 22.32 | 25.98 |
| Bra017906.1-P | Field mustard | nucleus | 19.57 | 25.3 |
| Zm00001d051700_P001 | Maize | mitochondrion | 19.27 | 24.9 |
| CDY50231 | Canola | nucleus | 19.27 | 24.9 |
| CDY04620 | Canola | nucleus | 19.27 | 24.8 |
| CDY00373 | Canola | nucleus | 19.57 | 24.62 |
| AT1G21340.1 | Thale cress | nucleus | 19.27 | 24.23 |
| KRH64521 | Soybean | nucleus | 21.41 | 24.22 |
| CDY61064 | Canola | nucleus | 19.27 | 24.14 |
| Bra012277.1-P | Field mustard | nucleus | 19.27 | 24.14 |
| PGSC0003DMT400002060 | Potato | nucleus | 19.57 | 24.06 |
| Solyc04g070960.1.1 | Tomato | nucleus | 19.57 | 23.97 |
| KRH53419 | Soybean | nucleus | 20.8 | 23.53 |
| Zm00001d017788_P001 | Maize | nucleus | 19.57 | 22.22 |
| Zm00001d051577_P001 | Maize | nucleus | 19.57 | 21.55 |
| Zm00001d017900_P001 | Maize | nucleus | 19.57 | 21.33 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 22.02 | 20.22 |
| Zm00001d051439_P001 | Maize | nucleus | 22.32 | 19.89 |
| Zm00001d011058_P001 | Maize | nucleus | 20.49 | 19.82 |
| Zm00001d017575_P001 | Maize | nucleus | 22.63 | 19.79 |
| Zm00001d030727_P002 | Maize | nucleus | 19.88 | 19.06 |
| Zm00001d041549_P001 | Maize | nucleus | 19.88 | 18.95 |
| Zm00001d013783_P001 | Maize | nucleus | 16.82 | 18.9 |
| Zm00001d034163_P001 | Maize | nucleus | 20.49 | 18.56 |
| Zm00001d047802_P001 | Maize | nucleus | 21.71 | 18.3 |
| Zm00001d029512_P001 | Maize | nucleus | 19.57 | 18.23 |
| Zm00001d028625_P002 | Maize | nucleus | 21.41 | 18.09 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 19.88 | 17.62 |
| Zm00001d035651_P001 | Maize | nucleus | 19.57 | 17.53 |
| Zm00001d033093_P001 | Maize | nucleus | 19.27 | 17.5 |
| Zm00001d034651_P002 | Maize | nucleus | 20.8 | 16.46 |
| Zm00001d002642_P001 | Maize | nucleus | 22.63 | 15.45 |
| Zm00001d021591_P001 | Maize | nucleus | 16.82 | 15.28 |
| Zm00001d006463_P001 | Maize | plastid | 14.98 | 13.96 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 21.41 | 11.15 |
Protein Annotations
| EntrezGene:100283959 | MapMan:15.5.1.5 | ProteinID:AQK86218.1 | EMBL:BT087262 | UniProt:C4J8W5 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF72 | UniParc:UPI0001609766 | EnsemblPlantsGene:Zm00001d038281 | EnsemblPlants:Zm00001d038281_P001 | EnsemblPlants:Zm00001d038281_T001 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
C2C2-Dof-transcription factor 20Dof zinc finger protein DOF1.2
Coordinates
chr6:+:153208694..153209677
Molecular Weight (calculated)
34608.6 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.317
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHRESLL PYAPGRRAAV LLDHRRYRPN VEVAPSCPRC DSPNTKFCYY NNYSLSQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKNRSR GKPVRAVAVD
101: SVAPSSGGAA AFTHRASASS SSASPATLRP DMLLEGMLGS PSELCQLTVT DDDAAENPAV APDGPRIDLA LLYAKFLNQQ PPAPERRAVL PESLVVDTLS
201: GSSSSDVGPV VPSRDHQPFT TQDDGLGELS AAASAEPSAP PPQSSSCAEA LIGAFGMDQR CYDSLGLPPD GGDLVLPSTW PLLGAKYELF DPLPEDAVSL
301: QDGFAGDEDV WSGALACQGL EAALCRP
101: SVAPSSGGAA AFTHRASASS SSASPATLRP DMLLEGMLGS PSELCQLTVT DDDAAENPAV APDGPRIDLA LLYAKFLNQQ PPAPERRAVL PESLVVDTLS
201: GSSSSDVGPV VPSRDHQPFT TQDDGLGELS AAASAEPSAP PPQSSSCAEA LIGAFGMDQR CYDSLGLPPD GGDLVLPSTW PLLGAKYELF DPLPEDAVSL
301: QDGFAGDEDV WSGALACQGL EAALCRP
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.