Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21095 | Sorghum | nucleus | 85.75 | 81.3 |
| Zm00001d011058_P001 | Maize | nucleus | 69.59 | 75.15 |
| Os05t0112200-01 | Rice | nucleus | 56.44 | 71.03 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 63.01 | 62.67 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 62.74 | 62.57 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 61.64 | 62.33 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 61.64 | 61.64 |
| TraesCS3A01G539000.1 | Wheat | nucleus | 35.89 | 48.7 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 49.59 | 48.14 |
| TraesCS3A01G532000.1 | Wheat | nucleus | 48.49 | 47.58 |
| Bra009587.1-P | Field mustard | nucleus | 23.01 | 47.46 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 48.49 | 47.07 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 49.32 | 45.34 |
| Zm00001d034653_P001 | Maize | nucleus | 23.29 | 37.95 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 26.85 | 31.11 |
| CDY40358 | Canola | nucleus | 28.22 | 30.93 |
| KRH46814 | Soybean | nucleus | 30.96 | 30.79 |
| Zm00001d034651_P002 | Maize | nucleus | 34.25 | 30.27 |
| KRG99864 | Soybean | nucleus | 29.86 | 30.03 |
| Zm00001d030727_P002 | Maize | nucleus | 27.95 | 29.91 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 29.04 | 29.86 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 28.49 | 29.55 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 27.95 | 29.39 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 27.95 | 29.31 |
| Zm00001d041549_P001 | Maize | nucleus | 27.4 | 29.15 |
| Zm00001d028625_P002 | Maize | nucleus | 30.68 | 28.94 |
| KRH70477 | Soybean | nucleus | 29.32 | 28.84 |
| CDY70704 | Canola | nucleus | 28.77 | 28.77 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 27.95 | 28.73 |
| Solyc09g010680.2.1 | Tomato | nucleus | 31.23 | 28.64 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 29.86 | 28.53 |
| CDY55549 | Canola | nucleus | 31.23 | 28.36 |
| Zm00001d047802_P001 | Maize | nucleus | 30.14 | 28.35 |
| Bra005725.1-P | Field mustard | nucleus | 31.23 | 28.29 |
| CDX80822 | Canola | nucleus | 30.96 | 27.83 |
| AT5G02460.1 | Thale cress | nucleus | 30.41 | 27.82 |
| Bra028872.1-P | Field mustard | nucleus | 30.41 | 27.34 |
| CDY04855 | Canola | nucleus | 30.41 | 27.34 |
| PGSC0003DMT400023033 | Potato | nucleus | 30.14 | 27.3 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 28.22 | 27.18 |
| CDY55422 | Canola | nucleus | 29.59 | 26.93 |
| Zm00001d051700_P001 | Maize | mitochondrion | 18.36 | 26.48 |
| Zm00001d013783_P001 | Maize | nucleus | 18.9 | 23.71 |
| Zm00001d017900_P001 | Maize | nucleus | 18.9 | 23.0 |
| Zm00001d033093_P001 | Maize | nucleus | 21.37 | 21.67 |
| Zm00001d017788_P001 | Maize | nucleus | 16.99 | 21.53 |
| Zm00001d021591_P001 | Maize | nucleus | 20.82 | 21.11 |
| Zm00001d051577_P001 | Maize | nucleus | 16.71 | 20.54 |
| Zm00001d012280_P001 | Maize | nucleus | 18.63 | 20.12 |
| Zm00001d042736_P001 | Maize | nucleus | 17.81 | 20.0 |
| Zm00001d038281_P001 | Maize | mitochondrion, nucleus | 17.53 | 19.57 |
| Zm00001d017575_P001 | Maize | nucleus | 20.0 | 19.52 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 32.6 | 18.95 |
| Zm00001d006463_P001 | Maize | plastid | 18.08 | 18.8 |
| Zm00001d051439_P001 | Maize | nucleus | 18.63 | 18.53 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 18.36 | 18.16 |
| Zm00001d029512_P001 | Maize | nucleus | 16.99 | 17.66 |
| Zm00001d034163_P001 | Maize | nucleus | 17.26 | 17.45 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 16.99 | 17.42 |
| Zm00001d002642_P001 | Maize | nucleus | 18.08 | 13.78 |
| Bra009588.1-P | Field mustard | plastid | 5.21 | 10.67 |
Protein Annotations
| EntrezGene:103629246 | MapMan:15.5.1.5 | UniProt:A0A1D6LHP6 | ProteinID:AQK79395.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF59 | UniParc:UPI0002214EA5 | EnsemblPlantsGene:Zm00001d035651 | EnsemblPlants:Zm00001d035651_P001 | EnsemblPlants:Zm00001d035651_T001 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
DNA binding with one finger3 DNA binding with one finger3
Coordinates
chr6:+:38682464..38684890
Molecular Weight (calculated)
37997.0 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.476
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFPPAFLQD SSSWNDNQHQ QQQHHHQQQG HGHLQIAVSG SGDANHELLQ QPIMGGALPD GGGGGGGGGQ VGGPAKPMSM AERARLARIP LPEPGLKCPR
101: CDSTNTKFCY FNNYSLTQPR HFCRACRRYW TRGGALRNVP VGGGYRRHAK RAKPKQQQQQ HAAAGTGAAT GAMQQPPAGS MASSAAACTA TTTMTTNALH
201: AGPGGGMLPM LPPLLRLADF DAMSLGSSFS GISSMGKPGS IGAACYPHSV GGLEQWRVQQ MQSFPFLHAM DQGPLGPPLA MAMAAPGGMF QLGLDTTSDN
301: SRGGGGGGED GSSAGEALHM MQATKRESYP AAPRAMYGDQ QHNHLAAAGG YTSYSTNAAA GNHLL
101: CDSTNTKFCY FNNYSLTQPR HFCRACRRYW TRGGALRNVP VGGGYRRHAK RAKPKQQQQQ HAAAGTGAAT GAMQQPPAGS MASSAAACTA TTTMTTNALH
201: AGPGGGMLPM LPPLLRLADF DAMSLGSSFS GISSMGKPGS IGAACYPHSV GGLEQWRVQQ MQSFPFLHAM DQGPLGPPLA MAMAAPGGMF QLGLDTTSDN
301: SRGGGGGGED GSSAGEALHM MQATKRESYP AAPRAMYGDQ QHNHLAAAGG YTSYSTNAAA GNHLL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.