Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G036700.2 | Wheat | nucleus | 76.21 | 60.38 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 74.14 | 59.56 |
| TraesCS1B01G045000.3 | Wheat | nucleus | 74.83 | 59.13 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 74.14 | 58.9 |
| Zm00001d011058_P001 | Maize | nucleus | 67.24 | 57.69 |
| Zm00001d035651_P001 | Maize | nucleus | 71.03 | 56.44 |
| KXG21095 | Sorghum | nucleus | 73.1 | 55.06 |
| TraesCS3A01G539000.1 | Wheat | nucleus | 46.21 | 49.81 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 53.1 | 40.96 |
| TraesCS3A01G532000.1 | Wheat | nucleus | 51.72 | 40.32 |
| TraesCS3B01G608800.1 | Wheat | nucleus | 51.72 | 39.89 |
| Bra009587.1-P | Field mustard | nucleus | 23.79 | 38.98 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 52.76 | 38.54 |
| KRH46814 | Soybean | nucleus | 37.59 | 29.7 |
| KRG99864 | Soybean | nucleus | 36.9 | 29.48 |
| Os03t0821200-00 | Rice | nucleus | 41.38 | 28.99 |
| Os07t0236700-01 | Rice | nucleus | 35.17 | 28.9 |
| CDY40358 | Canola | nucleus | 31.03 | 27.03 |
| Os12t0569900-01 | Rice | nucleus | 32.41 | 27.01 |
| CDY55549 | Canola | nucleus | 36.55 | 26.37 |
| CDX80822 | Canola | nucleus | 36.55 | 26.11 |
| Bra005725.1-P | Field mustard | nucleus | 36.21 | 26.05 |
| AT5G02460.1 | Thale cress | nucleus | 35.52 | 25.81 |
| CDY70704 | Canola | nucleus | 32.41 | 25.75 |
| TraesCS3B01G608900.1 | Wheat | nucleus | 31.38 | 25.63 |
| TraesCS3B01G609000.1 | Wheat | nucleus | 31.03 | 25.57 |
| CDY55422 | Canola | nucleus | 35.17 | 25.44 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 27.59 | 25.4 |
| Solyc09g010680.2.1 | Tomato | nucleus | 34.83 | 25.38 |
| Bra028872.1-P | Field mustard | nucleus | 35.52 | 25.37 |
| CDY04855 | Canola | nucleus | 35.52 | 25.37 |
| KRH70477 | Soybean | nucleus | 32.41 | 25.34 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 30.34 | 25.29 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 30.34 | 24.79 |
| TraesCS3B01G609100.1 | Wheat | nucleus | 29.66 | 24.78 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 32.41 | 24.61 |
| PGSC0003DMT400023033 | Potato | nucleus | 33.79 | 24.32 |
| Os02t0726300-01 | Rice | nucleus | 23.45 | 24.11 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 30.69 | 23.48 |
| Os02t0707200-00 | Rice | nucleus | 21.38 | 21.53 |
| Os05t0440000-00 | Rice | nucleus | 23.79 | 21.1 |
| Os06t0284500-00 | Rice | nucleus | 20.69 | 20.76 |
| Os01t0865800-00 | Rice | nucleus | 23.45 | 20.67 |
| Os04t0567800-01 | Rice | nucleus | 23.1 | 18.46 |
| Os03t0276300-00 | Rice | cytosol | 8.62 | 17.99 |
| Os03t0764900-01 | Rice | nucleus | 21.72 | 17.55 |
| Os07t0508900-00 | Rice | cytosol | 2.41 | 17.5 |
| Os02t0673700-01 | Rice | nucleus | 22.76 | 17.32 |
| Os02t0252400-01 | Rice | nucleus | 20.69 | 16.09 |
| Bra009588.1-P | Field mustard | plastid | 7.93 | 12.92 |
| Os07t0508700-00 | Rice | cytosol | 2.41 | 6.73 |
Protein Annotations
| MapMan:15.5.1.5 | ProteinID:AAU44212.1 | ProteinID:BAF16364.1 | ProteinID:BAS91938.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | EnsemblPlantsGene:Os05g0112200 | EnsemblPlants:Os05t0112200-01 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF59 | UniProt:Q65XV0 | UniParc:UPI000043F3C3 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
DNA BINDING WITH ONE FINGER 19Similar to Zn finger protein (Fragment). (Os05t0112200-01)
Coordinates
chr5:-:658112..660002
Molecular Weight (calculated)
29830.5 Da
IEP (calculated)
9.421
GRAVY (calculated)
-0.312
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPGTLADGG GGGGAVGPAK PMSMSERARL ARIPLPEPGL KCPRCDSTNT KFCYFNNYSL SQPRHFCRAC RRYWTRGGAL RNVPVGGGYR RHAKRAKPKP
101: ASAAGSASAA TTTAGSTPAG STTTTTTSST CATPNAPALP AMLGGNLSIL PPLLRLADFD AMSLGSTFSG MAAAAGKPPP VDAAGCYSVG AATGLEQWRL
201: QQMQSFPFFH AMDHQAAMAA PPPAMAMPGM FQLGLDGDGH GSGGGEDGGE LHHAMPSSKR EGYPRGMYGD HHLAGGYTSY SSATTGNHLL
101: ASAAGSASAA TTTAGSTPAG STTTTTTSST CATPNAPALP AMLGGNLSIL PPLLRLADFD AMSLGSTFSG MAAAAGKPPP VDAAGCYSVG AATGLEQWRL
201: QQMQSFPFFH AMDHQAAMAA PPPAMAMPGM FQLGLDGDGH GSGGGEDGGE LHHAMPSSKR EGYPRGMYGD HHLAGGYTSY SSATTGNHLL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.