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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009587.1-P Field mustard nucleus 21.81 43.5
Os03t0821200-00 Rice nucleus 48.44 41.3
KRH46814 Soybean nucleus 37.68 36.24
KRG99864 Soybean nucleus 37.11 36.09
Os05t0112200-01 Rice nucleus 28.9 35.17
Os12t0569900-01 Rice nucleus 30.03 30.46
CDX80822 Canola nucleus 34.84 30.3
PGSC0003DMT400023033 Potato nucleus 34.56 30.27
KRH70477 Soybean nucleus 31.73 30.19
CDY55422 Canola nucleus 34.28 30.17
Solyc09g010680.2.1 Tomato nucleus 33.99 30.15
CDY55549 Canola nucleus 34.28 30.1
Bra028872.1-P Field mustard nucleus 34.56 30.05
CDY04855 Canola nucleus 34.56 30.05
CDY40358 Canola nucleus 28.33 30.03
Bra005725.1-P Field mustard nucleus 34.28 30.02
AT5G02460.1 Thale cress nucleus 33.71 29.82
CDY70704 Canola nucleus 30.59 29.59
Os02t0726300-01 Rice nucleus 19.26 24.11
Os02t0673700-01 Rice nucleus 25.5 23.62
Os02t0707200-00 Rice nucleus 19.26 23.61
Os04t0567800-01 Rice nucleus 23.51 22.86
Os07t0508900-00 Rice cytosol 2.55 22.5
Os06t0284500-00 Rice nucleus 18.41 22.49
Os01t0865800-00 Rice nucleus 20.11 21.58
Os03t0276300-00 Rice cytosol 8.22 20.86
Os05t0440000-00 Rice nucleus 17.0 18.35
Os03t0764900-01 Rice nucleus 17.28 16.99
Os02t0252400-01 Rice nucleus 16.43 15.55
Bra009588.1-P Field mustard plastid 7.65 15.17
Os07t0508700-00 Rice cytosol 1.98 6.73
Protein Annotations
MapMan:15.5.1.5UniProt:A0A0P0X462ProteinID:BAT00745.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR003851
EnsemblPlantsGene:Os07g0236700EnsemblPlants:Os07t0236700-01PFAM:PD007478PFAM:PF02701ScanProsite:PS01361PFscan:PS50884
PANTHER:PTHR31992PANTHER:PTHR31992:SF66UniParc:UPI000393B0C0InterPro:Znf_DofSEG:seg:
Description
DNA BINDING WITH ONE FINGER 21Zinc finger, Dof-type domain containing protein. (Os07t0236700-01)
Coordinates
chr7:-:7604107..7605638
Molecular Weight (calculated)
35359.8 Da
IEP (calculated)
9.946
GRAVY (calculated)
-0.250
Length
353 amino acids
Sequence
(BLAST)
001: QHQAHHGHHQ LHQSVEANQL PMTSASLLLA PRSPDMAAAG ILPVSGGGGA SSARPVSMAE RARMAKIPQP EPGLKCPRCD STNTKFCYFN NYSLTQPRHF
101: CKACRRYWTR GGALRNVPVG GGFRRNKRGT KPSNSKKPAA AVAGGVMAPP HAQLQLPFGF DGGGGGGHGS IIGGGGGGGA SRLGFPELSS LHAAAAVDYQ
201: LGGGGGGDGL GLERQRLPHF PFLARSNAAV HPPPLMSTAA GVSYPFGDVA AGGLGGDMPA NAASVAGSAG LITQMASVKM DDIDNHPPPS AATTTASSPI
301: EFLGLRGSLQ FWGGGGGHRG GGDGAGGSAA PGGGGGGWSD LPAFDLSTSG NIL
Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.