Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009587.1-P | Field mustard | nucleus | 49.25 | 92.66 |
| CDY70704 | Canola | nucleus | 95.2 | 86.85 |
| Bra009588.1-P | Field mustard | plastid | 45.05 | 84.27 |
| CDY04855 | Canola | nucleus | 86.19 | 70.69 |
| CDY55422 | Canola | nucleus | 84.68 | 70.32 |
| CDY55549 | Canola | nucleus | 84.08 | 69.65 |
| CDX80822 | Canola | nucleus | 84.68 | 69.46 |
| AT5G02460.1 | Thale cress | nucleus | 81.98 | 68.42 |
| CDY70840 | Canola | nucleus | 16.22 | 47.79 |
| CDY07781 | Canola | nucleus | 29.73 | 46.26 |
| CDX93365 | Canola | nucleus | 36.04 | 38.84 |
| CDX74947 | Canola | nucleus | 37.84 | 38.77 |
| CDX79743 | Canola | nucleus | 33.93 | 38.57 |
| CDY65260 | Canola | nucleus | 35.74 | 38.51 |
| CDX91370 | Canola | nucleus | 37.54 | 38.46 |
| KRH46814 | Soybean | nucleus | 40.84 | 37.06 |
| KRG99864 | Soybean | nucleus | 39.94 | 36.64 |
| CDX73385 | Canola | nucleus | 32.43 | 35.76 |
| PGSC0003DMT400023033 | Potato | nucleus | 42.04 | 34.74 |
| Solyc09g010680.2.1 | Tomato | nucleus | 41.44 | 34.67 |
| CDY69145 | Canola | nucleus, plastid | 32.43 | 34.29 |
| CDY15624 | Canola | nucleus | 33.63 | 33.53 |
| CDX77212 | Canola | nucleus | 33.33 | 32.65 |
| KRH70477 | Soybean | nucleus | 36.04 | 32.34 |
| CDY31735 | Canola | nucleus | 33.33 | 32.27 |
| CDX95139 | Canola | nucleus | 32.43 | 32.14 |
| CDY40213 | Canola | nucleus | 33.33 | 31.27 |
| CDY06274 | Canola | nucleus | 29.43 | 31.21 |
| Os05t0112200-01 | Rice | nucleus | 27.03 | 31.03 |
| CDX76102 | Canola | nucleus | 35.44 | 30.97 |
| CDY61965 | Canola | nucleus | 28.53 | 30.55 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 33.33 | 29.37 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 33.33 | 29.13 |
| CDY08775 | Canola | nucleus | 17.12 | 29.08 |
| TraesCS4A01G097800.1 | Wheat | nucleus | 33.33 | 28.98 |
| Os07t0236700-01 | Rice | nucleus | 30.03 | 28.33 |
| Zm00001d035651_P001 | Maize | nucleus | 30.93 | 28.22 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 25.83 | 27.3 |
| Zm00001d011058_P001 | Maize | nucleus | 27.63 | 27.22 |
| KXG21095 | Sorghum | nucleus | 31.23 | 27.01 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 29.43 | 26.85 |
| CDY16836 | Canola | nucleus | 20.72 | 25.84 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 30.63 | 25.69 |
| CDX80191 | Canola | nucleus | 19.82 | 25.68 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 26.43 | 25.29 |
| CDX87189 | Canola | nucleus | 18.92 | 25.2 |
| CDY31568 | Canola | nucleus | 19.52 | 25.19 |
| CDY53379 | Canola | nucleus | 16.52 | 25.11 |
| CDY29082 | Canola | nucleus | 18.02 | 25.0 |
| CDX90602 | Canola | nucleus | 18.02 | 24.9 |
| CDY09221 | Canola | nucleus | 18.92 | 24.42 |
| CDX78095 | Canola | nucleus | 17.72 | 24.38 |
| CDX71050 | Canola | nucleus | 18.32 | 24.11 |
| CDY40813 | Canola | nucleus | 20.12 | 23.67 |
| CDY02191 | Canola | nucleus | 20.72 | 23.47 |
| CDY59600 | Canola | nucleus | 17.12 | 23.36 |
| CDX88742 | Canola | nucleus | 19.22 | 23.1 |
| CDY42836 | Canola | nucleus | 19.82 | 23.08 |
| CDX77184 | Canola | nucleus | 17.42 | 22.66 |
| CDY70838 | Canola | nucleus | 20.72 | 22.55 |
| CDY33948 | Canola | nucleus | 20.12 | 22.19 |
| CDY70312 | Canola | nucleus | 18.92 | 22.18 |
| CDY70666 | Canola | nucleus | 19.52 | 21.89 |
| CDY37834 | Canola | nucleus | 19.82 | 21.71 |
| CDX81292 | Canola | nucleus | 18.32 | 21.63 |
| CDY51722 | Canola | nucleus | 18.02 | 21.58 |
| CDY72049 | Canola | nucleus | 19.22 | 21.55 |
| CDY07156 | Canola | nucleus | 18.02 | 21.51 |
| CDY00373 | Canola | nucleus | 16.22 | 20.77 |
| CDY61064 | Canola | nucleus | 15.92 | 20.31 |
| CDY35454 | Canola | nucleus | 20.72 | 20.18 |
| CDY50231 | Canola | nucleus | 15.32 | 20.16 |
| CDY04620 | Canola | nucleus | 15.32 | 20.08 |
| CDX86775 | Canola | nucleus | 18.62 | 19.94 |
| CDY72657 | Canola | nucleus | 17.42 | 19.86 |
| CDY64622 | Canola | nucleus | 19.22 | 19.81 |
| CDY35729 | Canola | nucleus | 17.72 | 19.73 |
| CDX71704 | Canola | nucleus | 19.82 | 19.7 |
| CDY41539 | Canola | nucleus | 21.62 | 19.67 |
| CDY66590 | Canola | nucleus | 19.22 | 19.57 |
| CDX80030 | Canola | nucleus | 21.32 | 19.51 |
| CDY71684 | Canola | nucleus | 19.52 | 19.4 |
| CDY15678 | Canola | nucleus | 18.92 | 19.27 |
| CDY08392 | Canola | nucleus | 19.52 | 19.23 |
| CDY03494 | Canola | nucleus | 19.82 | 19.19 |
| CDX90142 | Canola | nucleus | 18.02 | 18.99 |
| CDX92613 | Canola | nucleus | 19.52 | 18.95 |
| CDY71763 | Canola | nucleus | 19.52 | 18.95 |
| CDY57876 | Canola | nucleus | 20.42 | 18.84 |
| CDX89134 | Canola | extracellular, vacuole | 19.52 | 18.68 |
| CDY16754 | Canola | nucleus | 18.62 | 18.24 |
| CDX83357 | Canola | nucleus | 20.42 | 18.18 |
| CDX87270 | Canola | nucleus | 18.62 | 18.18 |
| CDY61727 | Canola | nucleus | 20.42 | 18.18 |
| CDX95706 | Canola | nucleus | 20.12 | 18.16 |
| CDY00341 | Canola | nucleus | 19.82 | 17.93 |
| CDX84369 | Canola | nucleus | 19.82 | 17.79 |
| CDY27314 | Canola | nucleus | 19.22 | 17.78 |
| CDY24798 | Canola | nucleus | 20.42 | 15.01 |
| CDY08776 | Canola | nucleus | 1.8 | 6.98 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HUB1 | UniProt:A0A078HUB1 | EnsemblPlants:CDY40358 | ProteinID:CDY40358 | ProteinID:CDY40358.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00069547001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EE6C9F | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g27100DBnaA10g27100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUB1]
Coordinates
chrLK032468:-:252503..253839
Molecular Weight (calculated)
36066.7 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.761
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSFPTYP DSSNWQQQHQ PITSTVGFTG NNNNINQQFF PHHPLPPQPQ QTPQPLHHNG NGAGGGGSGG PSGLIRPGSM AERARLANIP LPETALKCPR
101: CDSSNTKFCY FNNYSLTQPR HFCKSCRRYW TCGGALRSVP VGGGCRRNKR TKNSGGCGGS STSGNSKSQD STTSNDQYHH RAMANNQMGP PSSSTSLSSL
201: LSSYNAGLIP GHNHSNNVHG IGSSSTPLNL MPPLDFTDNF TLPFEQWRFP ATHQQLPLLG GLDNSSSSGL YPFDHQNQTG MHQQNPKNTF YNISSASSAM
301: VTATASQLAS VKMEDSNNQL NMSKQLFGNE HHL
101: CDSSNTKFCY FNNYSLTQPR HFCKSCRRYW TCGGALRSVP VGGGCRRNKR TKNSGGCGGS STSGNSKSQD STTSNDQYHH RAMANNQMGP PSSSTSLSSL
201: LSSYNAGLIP GHNHSNNVHG IGSSSTPLNL MPPLDFTDNF TLPFEQWRFP ATHQQLPLLG GLDNSSSSGL YPFDHQNQTG MHQQNPKNTF YNISSASSAM
301: VTATASQLAS VKMEDSNNQL NMSKQLFGNE HHL
001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI
Arabidopsis Description
DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.