Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65260 | Canola | nucleus | 95.47 | 95.47 |
| CDY07781 | Canola | nucleus | 61.49 | 88.78 |
| CDX74947 | Canola | nucleus | 90.94 | 86.46 |
| CDX91370 | Canola | nucleus | 90.29 | 85.85 |
| CDX79743 | Canola | nucleus | 77.99 | 82.25 |
| AT2G37590.1 | Thale cress | nucleus | 87.06 | 81.52 |
| CDY70840 | Canola | nucleus | 17.8 | 48.67 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 45.95 | 41.16 |
| Zm00001d034653_P001 | Maize | nucleus | 29.77 | 41.07 |
| CDX73385 | Canola | nucleus | 36.25 | 37.09 |
| CDY40358 | Canola | nucleus | 38.84 | 36.04 |
| CDY70704 | Canola | nucleus | 42.39 | 35.89 |
| Solyc10g086440.1.1 | Tomato | nucleus | 41.1 | 35.08 |
| PGSC0003DMT400049288 | Potato | nucleus | 41.42 | 34.22 |
| CDY69145 | Canola | nucleus, plastid | 34.63 | 33.97 |
| CDY55422 | Canola | nucleus | 43.69 | 33.67 |
| CDY55549 | Canola | nucleus | 43.37 | 33.33 |
| CDX80822 | Canola | nucleus | 43.69 | 33.25 |
| CDY04855 | Canola | nucleus | 43.37 | 33.0 |
| CDY40213 | Canola | nucleus | 36.89 | 32.11 |
| Zm00001d034651_P002 | Maize | nucleus | 41.42 | 30.99 |
| Os03t0821200-00 | Rice | nucleus | 41.42 | 30.92 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 28.16 | 30.42 |
| KXG37254 | Sorghum | nucleus | 42.72 | 30.34 |
| CDX76102 | Canola | nucleus | 37.22 | 30.18 |
| CDY15624 | Canola | nucleus | 32.04 | 29.64 |
| CDX95139 | Canola | nucleus | 32.04 | 29.46 |
| CDX77212 | Canola | nucleus | 31.72 | 28.82 |
| CDY06274 | Canola | nucleus | 29.13 | 28.66 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 41.42 | 28.44 |
| CDY61965 | Canola | nucleus | 28.48 | 28.3 |
| CDY31735 | Canola | nucleus | 31.39 | 28.2 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 41.1 | 28.1 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 40.78 | 27.69 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 41.75 | 27.62 |
| CDY08775 | Canola | nucleus | 17.48 | 27.55 |
| CDY53379 | Canola | nucleus | 19.42 | 27.4 |
| CDY29082 | Canola | nucleus | 20.06 | 25.83 |
| CDX90602 | Canola | nucleus | 20.06 | 25.73 |
| CDX80191 | Canola | nucleus | 20.71 | 24.9 |
| CDY31568 | Canola | nucleus | 20.71 | 24.81 |
| CDX77184 | Canola | nucleus | 20.39 | 24.61 |
| CDY59600 | Canola | nucleus | 19.42 | 24.59 |
| CDX78095 | Canola | nucleus | 18.77 | 23.97 |
| CDY09221 | Canola | nucleus | 19.42 | 23.26 |
| CDY40813 | Canola | nucleus | 21.04 | 22.97 |
| CDY70312 | Canola | nucleus | 21.04 | 22.89 |
| CDY70838 | Canola | nucleus | 22.65 | 22.88 |
| CDY04620 | Canola | nucleus | 18.77 | 22.83 |
| CDY02191 | Canola | nucleus | 21.68 | 22.79 |
| CDY72657 | Canola | nucleus | 21.36 | 22.6 |
| CDX71050 | Canola | nucleus | 18.45 | 22.53 |
| CDX87189 | Canola | nucleus | 18.12 | 22.4 |
| CDY42836 | Canola | nucleus | 20.71 | 22.38 |
| CDY70666 | Canola | nucleus | 21.36 | 22.22 |
| CDY50231 | Canola | nucleus | 18.12 | 22.13 |
| CDY71684 | Canola | nucleus | 23.95 | 22.09 |
| CDX81292 | Canola | nucleus | 20.06 | 21.99 |
| CDY72049 | Canola | nucleus | 21.04 | 21.89 |
| CDY33948 | Canola | nucleus | 21.36 | 21.85 |
| CDY03494 | Canola | nucleus | 24.27 | 21.8 |
| CDY16836 | Canola | nucleus | 18.77 | 21.72 |
| CDX88742 | Canola | nucleus | 19.42 | 21.66 |
| CDY71763 | Canola | nucleus | 23.95 | 21.57 |
| CDX92613 | Canola | nucleus | 23.95 | 21.57 |
| CDX87270 | Canola | nucleus | 23.62 | 21.41 |
| CDY37834 | Canola | nucleus | 21.04 | 21.38 |
| CDX86775 | Canola | nucleus | 21.36 | 21.22 |
| CDY16754 | Canola | nucleus | 23.3 | 21.18 |
| CDY00373 | Canola | nucleus | 17.48 | 20.77 |
| CDY64622 | Canola | nucleus | 21.68 | 20.74 |
| CDY35454 | Canola | nucleus | 22.65 | 20.47 |
| CDY08392 | Canola | nucleus | 22.33 | 20.41 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 41.42 | 20.38 |
| CDY61064 | Canola | nucleus | 17.15 | 20.31 |
| CDX71704 | Canola | nucleus | 22.01 | 20.3 |
| CDY66590 | Canola | nucleus | 21.36 | 20.18 |
| CDY15678 | Canola | nucleus | 21.36 | 20.18 |
| CDY51722 | Canola | nucleus | 18.12 | 20.14 |
| CDY07156 | Canola | nucleus | 18.12 | 20.07 |
| CDY41539 | Canola | nucleus | 23.62 | 19.95 |
| CDY00341 | Canola | nucleus | 23.62 | 19.84 |
| CDX80030 | Canola | nucleus | 23.3 | 19.78 |
| CDY35729 | Canola | nucleus | 19.09 | 19.73 |
| CDX90142 | Canola | nucleus | 20.06 | 19.62 |
| CDX89134 | Canola | extracellular, vacuole | 22.01 | 19.54 |
| CDX84369 | Canola | nucleus | 23.3 | 19.41 |
| CDY57876 | Canola | nucleus | 22.33 | 19.11 |
| CDX83357 | Canola | nucleus | 22.98 | 18.98 |
| CDX95706 | Canola | nucleus | 22.65 | 18.97 |
| CDY61727 | Canola | nucleus | 22.65 | 18.72 |
| CDY27314 | Canola | nucleus | 21.68 | 18.61 |
| CDY24798 | Canola | nucleus | 23.95 | 16.34 |
| CDY08776 | Canola | nucleus | 3.88 | 13.95 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 4.21 | 5.88 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078DVI2 | EnsemblPlants:CDX93365 | ProteinID:CDX93365 | ProteinID:CDX93365.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00155350001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EC0DFA |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC04g45310D
Coordinates
chrLK031875:-:1331004..1332963
Molecular Weight (calculated)
33152.0 Da
IEP (calculated)
8.991
GRAVY (calculated)
-0.704
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFSSIQAYL DSSNWQQAPP SNYNQGGEGA SATGGHGLGP QLQPQSQPQP NGSGSSGSIR PGSMVDRARH ANVAIPEAAL KCPRCESTNT KFCYFNNYSL
101: TQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNRRTKSSNN NNNSTATSNN TSFSSAASGN ASTISAILSS NYGGNQESFL SQILSPVRLM NTTYTTDNNM
201: SLLNCGGLNQ DLRSIQMGNS GGSLMSCVDE WRSTSHHQQP QSLGGGNCEA SSNTNPSSNG FYPFESPRIT SALASQFSSV KVEDNPYKWV NVNGNCSSWT
301: DLSTFGSSR
101: TQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNRRTKSSNN NNNSTATSNN TSFSSAASGN ASTISAILSS NYGGNQESFL SQILSPVRLM NTTYTTDNNM
201: SLLNCGGLNQ DLRSIQMGNS GGSLMSCVDE WRSTSHHQQP QSLGGGNCEA SSNTNPSSNG FYPFESPRIT SALASQFSSV KVEDNPYKWV NVNGNCSSWT
301: DLSTFGSSR
001: MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
101: FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT
201: YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS
301: VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR
Arabidopsis Description
DOF2.4Dof zinc finger protein DOF2.4 [Source:UniProtKB/Swiss-Prot;Acc:O80928]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.