Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07156 | Canola | nucleus | 95.32 | 94.98 |
| Bra037401.1-P | Field mustard | nucleus | 98.2 | 91.61 |
| AT4G00940.2 | Thale cress | nucleus | 78.06 | 73.81 |
| CDY70840 | Canola | nucleus | 20.14 | 49.56 |
| KRH53547 | Soybean | nucleus | 29.14 | 39.32 |
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 37.05 | 35.89 |
| KRH64383 | Soybean | nucleus | 36.69 | 34.34 |
| CDX71704 | Canola | nucleus | 38.13 | 31.64 |
| CDX86775 | Canola | nucleus | 35.25 | 31.51 |
| Solyc08g082910.1.1 | Tomato | nucleus | 35.97 | 31.45 |
| CDY64622 | Canola | nucleus | 36.33 | 31.27 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 32.73 | 31.16 |
| PGSC0003DMT400031928 | Potato | nucleus | 36.69 | 30.72 |
| CDY57876 | Canola | nucleus | 38.13 | 29.36 |
| CDX89134 | Canola | extracellular, vacuole | 36.33 | 29.02 |
| CDY61727 | Canola | nucleus | 38.85 | 28.88 |
| CDY27314 | Canola | nucleus | 37.05 | 28.61 |
| CDY41539 | Canola | nucleus | 37.41 | 28.42 |
| CDX95706 | Canola | nucleus | 37.41 | 28.18 |
| CDY72657 | Canola | nucleus | 29.5 | 28.08 |
| CDX83357 | Canola | nucleus | 37.77 | 28.07 |
| CDX80030 | Canola | nucleus | 36.69 | 28.02 |
| CDY71684 | Canola | nucleus | 32.73 | 27.16 |
| CDY08775 | Canola | nucleus | 19.06 | 27.04 |
| CDY53379 | Canola | nucleus | 21.22 | 26.94 |
| CDY31568 | Canola | nucleus | 24.82 | 26.74 |
| CDY29082 | Canola | nucleus | 23.02 | 26.67 |
| CDX92613 | Canola | nucleus | 32.73 | 26.53 |
| CDY71763 | Canola | nucleus | 32.73 | 26.53 |
| CDX80191 | Canola | nucleus | 24.46 | 26.46 |
| CDY08392 | Canola | nucleus | 32.01 | 26.33 |
| CDY35454 | Canola | nucleus | 32.37 | 26.32 |
| CDY03494 | Canola | nucleus | 32.37 | 26.16 |
| CDX90602 | Canola | nucleus | 22.66 | 26.14 |
| CDX71050 | Canola | nucleus | 23.74 | 26.09 |
| CDY09221 | Canola | nucleus | 24.1 | 25.97 |
| CDY07781 | Canola | nucleus | 19.78 | 25.7 |
| CDX87189 | Canola | nucleus | 23.02 | 25.6 |
| CDY59600 | Canola | nucleus | 21.94 | 25.0 |
| CDX78095 | Canola | nucleus | 21.58 | 24.79 |
| CDX77184 | Canola | nucleus | 21.94 | 23.83 |
| CDY16836 | Canola | nucleus | 22.66 | 23.6 |
| CDX88742 | Canola | nucleus | 23.38 | 23.47 |
| CDY50231 | Canola | nucleus | 20.14 | 22.13 |
| CDY02191 | Canola | nucleus | 23.38 | 22.11 |
| CDY16754 | Canola | nucleus | 26.98 | 22.06 |
| CDY04620 | Canola | nucleus | 20.14 | 22.05 |
| CDY00341 | Canola | nucleus | 29.14 | 22.01 |
| CDX87270 | Canola | nucleus | 26.98 | 21.99 |
| CDY40813 | Canola | nucleus | 22.3 | 21.91 |
| CDY70666 | Canola | nucleus | 23.38 | 21.89 |
| CDY42836 | Canola | nucleus | 22.3 | 21.68 |
| CDY72049 | Canola | nucleus | 23.02 | 21.55 |
| CDY00373 | Canola | nucleus | 19.78 | 21.15 |
| CDX84369 | Canola | nucleus | 28.06 | 21.02 |
| CDY61064 | Canola | nucleus | 19.42 | 20.69 |
| CDY35729 | Canola | nucleus | 21.94 | 20.4 |
| CDY37834 | Canola | nucleus | 22.3 | 20.39 |
| CDY69145 | Canola | nucleus, plastid | 23.02 | 20.32 |
| CDY33948 | Canola | nucleus | 21.94 | 20.2 |
| CDX79743 | Canola | nucleus | 21.22 | 20.14 |
| CDY24798 | Canola | nucleus | 32.73 | 20.09 |
| CDY70838 | Canola | nucleus | 21.94 | 19.93 |
| CDX73385 | Canola | nucleus | 21.58 | 19.87 |
| CDX90142 | Canola | nucleus | 22.3 | 19.62 |
| CDY70312 | Canola | nucleus | 19.78 | 19.37 |
| CDY15678 | Canola | nucleus | 22.66 | 19.27 |
| CDY66590 | Canola | nucleus | 22.66 | 19.27 |
| CDY15624 | Canola | nucleus | 22.66 | 18.86 |
| CDX81292 | Canola | nucleus | 19.06 | 18.79 |
| CDY65260 | Canola | nucleus | 20.86 | 18.77 |
| CDX93365 | Canola | nucleus | 20.14 | 18.12 |
| CDY40358 | Canola | nucleus | 21.58 | 18.02 |
| CDX74947 | Canola | nucleus | 20.86 | 17.85 |
| CDX91370 | Canola | nucleus | 20.86 | 17.85 |
| CDX95139 | Canola | nucleus | 21.22 | 17.56 |
| CDX77212 | Canola | nucleus | 21.22 | 17.35 |
| CDX76102 | Canola | nucleus | 23.74 | 17.32 |
| CDY70704 | Canola | nucleus | 22.66 | 17.26 |
| CDY40213 | Canola | nucleus | 21.94 | 17.18 |
| CDY31735 | Canola | nucleus | 21.22 | 17.15 |
| CDY61965 | Canola | nucleus | 19.06 | 17.04 |
| CDY06274 | Canola | nucleus | 18.7 | 16.56 |
| CDY55422 | Canola | nucleus | 21.94 | 15.21 |
| CDY55549 | Canola | nucleus | 21.94 | 15.17 |
| CDX80822 | Canola | nucleus | 21.94 | 15.02 |
| CDY04855 | Canola | nucleus | 21.94 | 15.02 |
| CDY08776 | Canola | nucleus | 2.52 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078IP67 | UniProt:A0A078IP67 | EnsemblPlants:CDY51722 | ProteinID:CDY51722 | ProteinID:CDY51722.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00004073001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EDF890 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g52090DBnaA09g52090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP67]
Coordinates
chrLK033021:-:68144..69236
Molecular Weight (calculated)
31387.8 Da
IEP (calculated)
8.180
GRAVY (calculated)
-1.188
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHHYTHHD HDQYQHHQMT ITNNNSYNTI ITTPPPRQQQ HRPQEPRNCP RCNSSNTKFC YYNNYSLAQP RYLCKSCRRY WTEGGSLRNV PVGGGSRKNK
101: KLPLLQPNSS SSSPAKNLPD LNPPFAFTSS SSTSTSSNPS KSTHQNNNDL SLSFSYPTMQ ERAQGHYGHF MDQAMSGGQN CLFSAPMGMI QFRQDYGHDH
201: NKTDIGFSLD SNKVDSNNQN NFLVNGGGSK LMFPYGDRDE HHHDHERHDD GNKKRESGSS NELWSGIILG GDSGGPTW
101: KLPLLQPNSS SSSPAKNLPD LNPPFAFTSS SSTSTSSNPS KSTHQNNNDL SLSFSYPTMQ ERAQGHYGHF MDQAMSGGQN CLFSAPMGMI QFRQDYGHDH
201: NKTDIGFSLD SNKVDSNNQN NFLVNGGGSK LMFPYGDRDE HHHDHERHDD GNKKRESGSS NELWSGIILG GDSGGPTW
001: MDHHQYHHHD QYQHQMMTST NNNSYNTIVT TQPPPTTTTM DSTTATTMIM DDEKKLMTTM STRPQEPRNC PRCNSSNTKF CYYNNYSLAQ PRYLCKSCRR
101: YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA
201: PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW
101: YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA
201: PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW
Arabidopsis Description
DOF4.1Dof zinc finger protein DOF4.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M161]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.