Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007156.1-P | Field mustard | nucleus | 81.69 | 88.69 |
| CDX73385 | Canola | nucleus | 74.93 | 88.08 |
| CDY69145 | Canola | nucleus, plastid | 68.45 | 77.14 |
| CDX76102 | Canola | nucleus | 76.34 | 71.13 |
| AT3G55370.3 | Thale cress | nucleus | 69.58 | 67.12 |
| CDY70840 | Canola | nucleus | 14.93 | 46.9 |
| CDY07781 | Canola | nucleus | 27.04 | 44.86 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 39.72 | 41.84 |
| CDX74947 | Canola | nucleus | 33.8 | 36.92 |
| CDY65260 | Canola | nucleus | 32.11 | 36.89 |
| CDX93365 | Canola | nucleus | 32.11 | 36.89 |
| CDX91370 | Canola | nucleus | 33.52 | 36.62 |
| CDX79743 | Canola | nucleus | 29.58 | 35.84 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 24.51 | 35.22 |
| CDY40358 | Canola | nucleus | 31.27 | 33.33 |
| CDY70704 | Canola | nucleus | 33.8 | 32.88 |
| CDY55422 | Canola | nucleus | 36.34 | 32.17 |
| CDY15624 | Canola | nucleus | 30.14 | 32.04 |
| CDY04855 | Canola | nucleus | 36.06 | 31.53 |
| CDY61965 | Canola | nucleus | 27.32 | 31.19 |
| CDY06274 | Canola | nucleus | 27.32 | 30.89 |
| CDX77212 | Canola | nucleus | 29.58 | 30.88 |
| CDY31735 | Canola | nucleus | 29.86 | 30.81 |
| CDY55549 | Canola | nucleus | 34.65 | 30.6 |
| CDX95139 | Canola | nucleus | 28.73 | 30.36 |
| CDX80822 | Canola | nucleus | 34.65 | 30.3 |
| CDY08775 | Canola | nucleus | 16.06 | 29.08 |
| CDY70666 | Canola | nucleus | 21.69 | 25.93 |
| CDY72049 | Canola | nucleus | 21.69 | 25.93 |
| CDY70312 | Canola | nucleus | 20.28 | 25.35 |
| CDY29082 | Canola | nucleus | 16.9 | 25.0 |
| CDX87189 | Canola | nucleus | 17.46 | 24.8 |
| CDY16836 | Canola | nucleus | 18.59 | 24.72 |
| CDY53379 | Canola | nucleus | 15.21 | 24.66 |
| CDX90602 | Canola | nucleus | 16.62 | 24.48 |
| CDY35729 | Canola | nucleus | 20.56 | 24.41 |
| CDY66590 | Canola | nucleus | 22.25 | 24.16 |
| CDX81292 | Canola | nucleus | 19.15 | 24.11 |
| CDX90142 | Canola | nucleus | 21.41 | 24.05 |
| CDY31568 | Canola | nucleus | 17.46 | 24.03 |
| CDX78095 | Canola | nucleus | 16.34 | 23.97 |
| CDY15678 | Canola | nucleus | 21.97 | 23.85 |
| CDX80191 | Canola | nucleus | 17.18 | 23.74 |
| CDX71050 | Canola | nucleus | 16.9 | 23.72 |
| CDY40813 | Canola | nucleus | 18.87 | 23.67 |
| CDY33948 | Canola | nucleus | 20.0 | 23.51 |
| CDY59600 | Canola | nucleus | 16.06 | 23.36 |
| CDY72657 | Canola | nucleus | 19.15 | 23.29 |
| CDY09221 | Canola | nucleus | 16.9 | 23.26 |
| CDY37834 | Canola | nucleus | 19.72 | 23.03 |
| CDY70838 | Canola | nucleus | 19.72 | 22.88 |
| CDX88742 | Canola | nucleus | 17.75 | 22.74 |
| CDY42836 | Canola | nucleus | 18.31 | 22.73 |
| CDY71684 | Canola | nucleus | 21.13 | 22.39 |
| CDY03494 | Canola | nucleus | 21.69 | 22.38 |
| CDX77184 | Canola | nucleus | 16.06 | 22.27 |
| CDY71763 | Canola | nucleus | 21.41 | 22.16 |
| CDX92613 | Canola | nucleus | 21.41 | 22.16 |
| CDY02191 | Canola | nucleus | 18.31 | 22.11 |
| CDY51722 | Canola | nucleus | 17.18 | 21.94 |
| CDY07156 | Canola | nucleus | 17.18 | 21.86 |
| CDX71704 | Canola | nucleus | 20.56 | 21.79 |
| CDX86775 | Canola | nucleus | 18.87 | 21.54 |
| CDX80030 | Canola | nucleus | 21.97 | 21.43 |
| CDY64622 | Canola | nucleus | 19.44 | 21.36 |
| CDY35454 | Canola | nucleus | 20.28 | 21.05 |
| CDY41539 | Canola | nucleus | 21.69 | 21.04 |
| CDY57876 | Canola | nucleus | 21.13 | 20.78 |
| CDX95706 | Canola | nucleus | 21.13 | 20.33 |
| CDX83357 | Canola | nucleus | 21.41 | 20.32 |
| CDY16754 | Canola | nucleus | 19.44 | 20.29 |
| CDX87270 | Canola | nucleus | 19.44 | 20.23 |
| CDX89134 | Canola | extracellular, vacuole | 19.72 | 20.11 |
| CDY61727 | Canola | nucleus | 21.13 | 20.05 |
| CDY50231 | Canola | nucleus | 14.08 | 19.76 |
| CDY27314 | Canola | nucleus | 20.0 | 19.72 |
| CDY04620 | Canola | nucleus | 14.08 | 19.68 |
| CDY08392 | Canola | nucleus | 18.31 | 19.23 |
| CDY00373 | Canola | nucleus | 14.08 | 19.23 |
| CDY61064 | Canola | nucleus | 13.8 | 18.77 |
| CDY00341 | Canola | nucleus | 19.15 | 18.48 |
| CDX84369 | Canola | nucleus | 19.15 | 18.33 |
| CDY24798 | Canola | nucleus | 20.28 | 15.89 |
| CDY08776 | Canola | nucleus | 1.97 | 8.14 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HTY7 | UniProt:A0A078HTY7 | EnsemblPlants:CDY40213 | ProteinID:CDY40213 | ProteinID:CDY40213.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00069363001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EE1C17 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g34950DBnaA09g34950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTY7]
Coordinates
chrLK032466:+:101558..103478
Molecular Weight (calculated)
39561.1 Da
IEP (calculated)
9.171
GRAVY (calculated)
-0.570
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSLPVNQ FDSHNWQQVI NIYDTIFFLS SRIYHEIYND DLFGCFSCIT FLKTKYYVNM QQGNTQQLDR VTSDQNPLQH FSSPPAAQAG SSQARVNSMV
101: ERARIAKIPL PEAALKCPRC ESTNTKFCYF NNYNLTQPRH FCKTCRRYWT RGGALRNVPV GGGFRRNKRK KPNGGGRSKA TVAVSADNNN TTSLLSCHPS
201: YSNPSKFLSY GQMPGFNSNL PILPPFQSLG YYNSSNIGLD WSSSGGIVDP WRISSLQQAQ QFPFLINAKG LEQPSTVMYP SLECNEGTAQ ARNVKAEEND
301: QGGNGLNNFS RNFLGNINIK PVEENDGYTS WGGSSNISSS WTGFTSNNST GHLSF
101: ERARIAKIPL PEAALKCPRC ESTNTKFCYF NNYNLTQPRH FCKTCRRYWT RGGALRNVPV GGGFRRNKRK KPNGGGRSKA TVAVSADNNN TTSLLSCHPS
201: YSNPSKFLSY GQMPGFNSNL PILPPFQSLG YYNSSNIGLD WSSSGGIVDP WRISSLQQAQ QFPFLINAKG LEQPSTVMYP SLECNEGTAQ ARNVKAEEND
301: QGGNGLNNFS RNFLGNINIK PVEENDGYTS WGGSSNISSS WTGFTSNNST GHLSF
001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.