Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010884.1-P | Field mustard | nucleus | 89.97 | 91.19 |
| CDX90142 | Canola | nucleus | 92.98 | 87.97 |
| CDY70666 | Canola | nucleus | 77.26 | 77.78 |
| CDY72049 | Canola | nucleus | 75.92 | 76.43 |
| AT1G28310.2 | Thale cress | nucleus | 81.61 | 72.84 |
| CDY15678 | Canola | nucleus | 77.59 | 70.95 |
| CDY66590 | Canola | nucleus | 77.59 | 70.95 |
| CDY70840 | Canola | nucleus | 15.72 | 41.59 |
| CDY08775 | Canola | nucleus | 18.06 | 27.55 |
| CDY31568 | Canola | nucleus | 21.4 | 24.81 |
| CDY53379 | Canola | nucleus | 17.73 | 24.2 |
| CDY09221 | Canola | nucleus | 20.74 | 24.03 |
| CDX80191 | Canola | nucleus | 20.4 | 23.74 |
| CDX71050 | Canola | nucleus | 20.07 | 23.72 |
| CDY07781 | Canola | nucleus | 16.72 | 23.36 |
| CDX87189 | Canola | nucleus | 19.4 | 23.2 |
| CDX73385 | Canola | nucleus | 23.08 | 22.85 |
| CDX88742 | Canola | nucleus | 20.4 | 22.02 |
| CDY51722 | Canola | nucleus | 20.4 | 21.94 |
| CDY07156 | Canola | nucleus | 20.4 | 21.86 |
| CDY15624 | Canola | nucleus | 24.41 | 21.86 |
| KRH10907 | Soybean | nucleus | 25.75 | 21.81 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 22.41 | 21.75 |
| CDY16836 | Canola | nucleus | 19.4 | 21.72 |
| CDY29082 | Canola | nucleus | 17.39 | 21.67 |
| CDY69145 | Canola | nucleus, plastid | 22.74 | 21.59 |
| CDX90602 | Canola | nucleus | 17.39 | 21.58 |
| CDY40813 | Canola | nucleus | 20.4 | 21.55 |
| CDX78095 | Canola | nucleus | 17.39 | 21.49 |
| CDY70312 | Canola | nucleus | 20.07 | 21.13 |
| CDY42836 | Canola | nucleus | 20.07 | 20.98 |
| CDY59600 | Canola | nucleus | 17.06 | 20.9 |
| CDX86775 | Canola | nucleus | 21.74 | 20.9 |
| CDY33948 | Canola | nucleus | 21.07 | 20.86 |
| CDY37834 | Canola | nucleus | 21.07 | 20.72 |
| CDX81292 | Canola | nucleus | 19.4 | 20.57 |
| CDY40213 | Canola | nucleus | 24.41 | 20.56 |
| KRH21402 | Soybean | nucleus | 24.41 | 20.45 |
| CDX71704 | Canola | nucleus | 22.74 | 20.3 |
| CDY70838 | Canola | nucleus | 20.74 | 20.26 |
| CDY41539 | Canola | nucleus | 24.75 | 20.22 |
| CDY50231 | Canola | nucleus | 17.06 | 20.16 |
| CDY04620 | Canola | nucleus | 17.06 | 20.08 |
| CDY02191 | Canola | nucleus | 19.73 | 20.07 |
| CDX80030 | Canola | nucleus | 24.41 | 20.05 |
| CDY00373 | Canola | nucleus | 17.39 | 20.0 |
| CDY61064 | Canola | nucleus | 17.39 | 19.92 |
| CDX77184 | Canola | nucleus | 17.06 | 19.92 |
| CDY72657 | Canola | nucleus | 19.4 | 19.86 |
| CDY64622 | Canola | nucleus | 21.4 | 19.81 |
| CDX95706 | Canola | nucleus | 24.41 | 19.78 |
| CDY27314 | Canola | nucleus | 23.75 | 19.72 |
| CDX95139 | Canola | nucleus | 22.07 | 19.64 |
| CDX83357 | Canola | nucleus | 24.41 | 19.52 |
| CDX79743 | Canola | nucleus | 19.06 | 19.45 |
| CDX89134 | Canola | extracellular, vacuole | 22.41 | 19.25 |
| CDY61727 | Canola | nucleus | 24.08 | 19.25 |
| CDY31735 | Canola | nucleus | 22.07 | 19.19 |
| CDX77212 | Canola | nucleus | 21.74 | 19.12 |
| CDY57876 | Canola | nucleus | 23.08 | 19.11 |
| CDX93365 | Canola | nucleus | 19.73 | 19.09 |
| CDY61965 | Canola | nucleus | 19.73 | 18.97 |
| CDY06274 | Canola | nucleus | 19.73 | 18.79 |
| CDY65260 | Canola | nucleus | 19.4 | 18.77 |
| CDX74947 | Canola | nucleus | 20.4 | 18.77 |
| CDX91370 | Canola | nucleus | 20.4 | 18.77 |
| GSMUA_Achr10P... | Banana | nucleus | 21.74 | 18.68 |
| EER97271 | Sorghum | nucleus | 22.07 | 18.64 |
| CDY08392 | Canola | nucleus | 21.07 | 18.64 |
| CDX76102 | Canola | nucleus | 23.08 | 18.11 |
| Zm00001d021591_P001 | Maize | nucleus | 21.74 | 18.06 |
| CDY40358 | Canola | nucleus | 19.73 | 17.72 |
| PGSC0003DMT400076447 | Potato | nucleus | 23.41 | 17.59 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 20.74 | 17.46 |
| CDY03494 | Canola | nucleus | 20.07 | 17.44 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 20.74 | 17.42 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 20.74 | 17.42 |
| Solyc02g077950.1.1 | Tomato | nucleus | 22.07 | 17.41 |
| CDY71684 | Canola | nucleus | 19.4 | 17.31 |
| CDX92613 | Canola | nucleus | 19.73 | 17.2 |
| CDY71763 | Canola | nucleus | 19.73 | 17.2 |
| Zm00001d006463_P001 | Maize | plastid | 20.07 | 17.09 |
| CDX87270 | Canola | nucleus | 19.06 | 16.72 |
| CDY00341 | Canola | nucleus | 20.4 | 16.58 |
| CDY16754 | Canola | nucleus | 18.73 | 16.47 |
| CDX84369 | Canola | nucleus | 20.4 | 16.44 |
| CDY70704 | Canola | nucleus | 20.07 | 16.44 |
| CDY35454 | Canola | nucleus | 18.73 | 16.37 |
| CDY55422 | Canola | nucleus | 20.74 | 15.46 |
| CDY55549 | Canola | nucleus | 20.74 | 15.42 |
| CDY04855 | Canola | nucleus | 20.74 | 15.27 |
| CDX80822 | Canola | nucleus | 20.4 | 15.02 |
| CDY24798 | Canola | nucleus | 19.4 | 12.8 |
| CDY08776 | Canola | nucleus | 2.01 | 6.98 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HE63 | UniProt:A0A078HE63 | EnsemblPlants:CDY35729 | ProteinID:CDY35729 | ProteinID:CDY35729.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00059157001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI0004EB3C73 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g58500DBnaC03g58500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE63]
Coordinates
chrLK032359:-:96477..97771
Molecular Weight (calculated)
32646.2 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.597
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKNTIVAP SHQQQQQQPP QLKCPRCDSS NTKFCYYNNY SLSQPRYFCK ACKRYWTQGG TLRNVPVGGS YRKNKRVKRP ATTTVASTAS TTTSSSPKNP
101: HHQISQFSSV NHHPLFYGLS DHVSSCNNLP MMVPSRFSDS SKTSSSSGLE SEFISSGFSG LGALGLGLPY YLNHDHTING SFLNNSTTNK PFLLSGLFGS
201: SVSSSSSTLL QHPHKTINNG GEMMGQSHIR TLAPLPHVGG NTDDMNKEGK LDQISGNING FMSSSSLNPS NYNNIWNNAS SMERLLISQI MTLDPSLPP
101: HHQISQFSSV NHHPLFYGLS DHVSSCNNLP MMVPSRFSDS SKTSSSSGLE SEFISSGFSG LGALGLGLPY YLNHDHTING SFLNNSTTNK PFLLSGLFGS
201: SVSSSSSTLL QHPHKTINNG GEMMGQSHIR TLAPLPHVGG NTDDMNKEGK LDQISGNING FMSSSSLNPS NYNNIWNNAS SMERLLISQI MTLDPSLPP
001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.