Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029352.1-P | Field mustard | nucleus | 93.71 | 96.4 |
| CDY40813 | Canola | nucleus | 94.06 | 95.05 |
| CDY02191 | Canola | nucleus | 84.97 | 82.65 |
| CDX87189 | Canola | nucleus | 67.13 | 76.8 |
| AT5G60850.1 | Thale cress | nucleus | 80.42 | 74.92 |
| CDY16836 | Canola | nucleus | 69.58 | 74.53 |
| CDY70840 | Canola | nucleus | 17.83 | 45.13 |
| KRH03180 | Soybean | nucleus | 45.1 | 43.0 |
| KRH56758 | Soybean | nucleus | 43.71 | 42.81 |
| PGSC0003DMT400010397 | Potato | nucleus | 44.76 | 40.13 |
| KRH54755 | Soybean | nucleus | 41.26 | 38.94 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 41.96 | 37.74 |
| KRH63162 | Soybean | nucleus | 41.26 | 34.6 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 19.93 | 29.23 |
| Zm00001d051700_P001 | Maize | mitochondrion | 25.52 | 28.85 |
| CDY07781 | Canola | nucleus | 20.63 | 27.57 |
| CDY08775 | Canola | nucleus | 18.53 | 27.04 |
| CDY53379 | Canola | nucleus | 20.28 | 26.48 |
| Os02t0726300-01 | Rice | nucleus | 25.52 | 25.89 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 25.17 | 24.83 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 24.83 | 24.57 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 24.83 | 24.4 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 24.13 | 24.3 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 24.13 | 24.3 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 24.13 | 24.3 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 19.93 | 24.05 |
| Zm00001d017900_P001 | Maize | nucleus | 25.17 | 24.0 |
| Os06t0284500-00 | Rice | nucleus | 24.13 | 23.88 |
| CDX77184 | Canola | nucleus | 20.63 | 23.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.38 | 22.94 |
| KXG30845 | Sorghum | nucleus | 24.13 | 22.7 |
| CDY07156 | Canola | nucleus | 22.03 | 22.58 |
| CDX80191 | Canola | nucleus | 20.28 | 22.57 |
| CDY70312 | Canola | nucleus | 22.38 | 22.54 |
| CDY50231 | Canola | nucleus | 19.93 | 22.53 |
| CDY09221 | Canola | nucleus | 20.28 | 22.48 |
| CDY31568 | Canola | nucleus | 20.28 | 22.48 |
| CDY04620 | Canola | nucleus | 19.93 | 22.44 |
| CDY51722 | Canola | nucleus | 21.68 | 22.3 |
| CDY72657 | Canola | nucleus | 22.73 | 22.26 |
| CDY69145 | Canola | nucleus, plastid | 24.48 | 22.22 |
| CDX71050 | Canola | nucleus | 19.58 | 22.13 |
| CDY29082 | Canola | nucleus | 18.53 | 22.08 |
| CDX90602 | Canola | nucleus | 18.53 | 21.99 |
| CDX78095 | Canola | nucleus | 18.53 | 21.9 |
| CDY61064 | Canola | nucleus | 19.93 | 21.84 |
| CDY59600 | Canola | nucleus | 18.53 | 21.72 |
| CDY00373 | Canola | nucleus | 19.58 | 21.54 |
| CDX73385 | Canola | nucleus | 22.73 | 21.52 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 23.78 | 21.32 |
| CDX81292 | Canola | nucleus | 20.98 | 21.28 |
| CDY33948 | Canola | nucleus | 22.38 | 21.19 |
| CDX79743 | Canola | nucleus | 21.33 | 20.82 |
| CDY37834 | Canola | nucleus | 22.03 | 20.72 |
| CDX93365 | Canola | nucleus | 22.38 | 20.71 |
| CDY65260 | Canola | nucleus | 22.38 | 20.71 |
| CDX88742 | Canola | nucleus | 19.93 | 20.58 |
| CDY03494 | Canola | nucleus | 24.48 | 20.35 |
| CDX80030 | Canola | nucleus | 25.87 | 20.33 |
| CDY71684 | Canola | nucleus | 23.78 | 20.3 |
| CDY70838 | Canola | nucleus | 21.68 | 20.26 |
| CDX95139 | Canola | nucleus | 23.78 | 20.24 |
| CDY35729 | Canola | nucleus | 20.98 | 20.07 |
| CDX74947 | Canola | nucleus | 22.73 | 20.0 |
| CDY41539 | Canola | nucleus | 25.52 | 19.95 |
| CDY35454 | Canola | nucleus | 23.78 | 19.88 |
| CDY15678 | Canola | nucleus | 22.73 | 19.88 |
| CDY66590 | Canola | nucleus | 22.73 | 19.88 |
| CDY70666 | Canola | nucleus | 20.63 | 19.87 |
| CDY72049 | Canola | nucleus | 20.63 | 19.87 |
| CDX92613 | Canola | nucleus | 23.78 | 19.83 |
| CDY71763 | Canola | nucleus | 23.78 | 19.83 |
| CDY40358 | Canola | nucleus | 23.08 | 19.82 |
| CDY15624 | Canola | nucleus | 23.08 | 19.76 |
| CDY27314 | Canola | nucleus | 24.83 | 19.72 |
| CDX91370 | Canola | nucleus | 22.38 | 19.69 |
| CDX86775 | Canola | nucleus | 21.33 | 19.61 |
| CDX77212 | Canola | nucleus | 23.08 | 19.41 |
| CDY00341 | Canola | nucleus | 24.83 | 19.29 |
| CDY61727 | Canola | nucleus | 25.17 | 19.25 |
| CDY31735 | Canola | nucleus | 23.08 | 19.19 |
| CDY08392 | Canola | nucleus | 22.38 | 18.93 |
| CDX76102 | Canola | nucleus | 25.17 | 18.9 |
| CDY64622 | Canola | nucleus | 21.33 | 18.89 |
| CDX71704 | Canola | nucleus | 22.03 | 18.81 |
| CDX87270 | Canola | nucleus | 22.38 | 18.77 |
| CDX90142 | Canola | nucleus | 20.63 | 18.67 |
| CDY61965 | Canola | nucleus | 20.28 | 18.65 |
| CDX84369 | Canola | nucleus | 24.13 | 18.6 |
| CDY16754 | Canola | nucleus | 22.03 | 18.53 |
| CDY40213 | Canola | nucleus | 22.73 | 18.31 |
| CDX83357 | Canola | nucleus | 23.78 | 18.18 |
| CDX95706 | Canola | nucleus | 23.43 | 18.16 |
| CDY06274 | Canola | nucleus | 19.93 | 18.15 |
| CDY70704 | Canola | nucleus | 23.08 | 18.08 |
| CDX89134 | Canola | extracellular, vacuole | 21.33 | 17.53 |
| CDY57876 | Canola | nucleus | 22.03 | 17.45 |
| CDY55422 | Canola | nucleus | 23.78 | 16.96 |
| CDY55549 | Canola | nucleus | 23.78 | 16.92 |
| CDX80822 | Canola | nucleus | 23.78 | 16.75 |
| CDY04855 | Canola | nucleus | 23.78 | 16.75 |
| CDY24798 | Canola | nucleus | 24.48 | 15.45 |
| CDY08776 | Canola | nucleus | 3.15 | 10.47 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078HYU8 | UniProt:A0A078HYU8 | EnsemblPlants:CDY42836 | ProteinID:CDY42836 | ProteinID:CDY42836.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00075525001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF71 | UniParc:UPI0004EED953 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng06610DBnaAnng06610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYU8]
Coordinates
chrLK032536:+:34835..35695
Molecular Weight (calculated)
30968.4 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.845
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNIHDYSMT GGGGGGSTGR FYGGGGGGDR RMRAHQNNIL NHHLKCPRCN SLNTKFCYYN NYNLSQPRHF CKNCRRYWTK GGVLRNVPVG GGCRKAKRSK
101: PKQDQPPSSA DKPTTQDVEE KSSSSESSSL TASNSTTTAA AVKVASSGFM GTDMPNNIKQ YGNGVVWSTL FGQGSSDGGV FSETNGFAAA STIETTPFEY
201: GGSSVNQQCI GDHLKFEGNT IRQQFGDRTA QVDPNMGFEP LDWGSGGGDD QTLFDLTSTV DHSYWSQSQW TSSSDHQDDQ NGLYLP
101: PKQDQPPSSA DKPTTQDVEE KSSSSESSSL TASNSTTTAA AVKVASSGFM GTDMPNNIKQ YGNGVVWSTL FGQGSSDGGV FSETNGFAAA STIETTPFEY
201: GGSSVNQQCI GDHLKFEGNT IRQQFGDRTA QVDPNMGFEP LDWGSGGGDD QTLFDLTSTV DHSYWSQSQW TSSSDHQDDQ NGLYLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.