Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013003.1-P | Field mustard | nucleus | 77.85 | 81.29 |
| CDY02191 | Canola | nucleus | 77.2 | 80.61 |
| CDY42836 | Canola | nucleus | 74.92 | 80.42 |
| CDY40813 | Canola | nucleus | 73.62 | 79.86 |
| CDX87189 | Canola | nucleus | 63.84 | 78.4 |
| Bra029352.1-P | Field mustard | nucleus | 70.68 | 78.06 |
| CDY16836 | Canola | nucleus | 66.12 | 76.03 |
| Bra035956.1-P | Field mustard | nucleus | 66.12 | 76.03 |
| KRH56758 | Soybean | nucleus | 44.95 | 47.26 |
| KRH03180 | Soybean | nucleus | 44.95 | 46.0 |
| PGSC0003DMT400010397 | Potato | nucleus | 44.63 | 42.95 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 43.65 | 42.14 |
| KRH54755 | Soybean | nucleus | 41.04 | 41.58 |
| KRH63162 | Soybean | nucleus | 43.0 | 38.71 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 19.87 | 31.28 |
| Zm00001d051700_P001 | Maize | mitochondrion | 24.76 | 30.04 |
| Os02t0726300-01 | Rice | nucleus | 24.76 | 26.95 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 25.08 | 26.64 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 25.08 | 26.55 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 24.76 | 26.12 |
| Zm00001d017900_P001 | Maize | nucleus | 24.76 | 25.33 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 19.54 | 25.32 |
| Os06t0284500-00 | Rice | nucleus | 23.78 | 25.26 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 22.8 | 24.65 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 22.8 | 24.65 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 22.8 | 24.65 |
| AT3G45610.1 | Thale cress | nucleus | 19.54 | 24.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.15 | 24.37 |
| KXG30845 | Sorghum | nucleus | 24.1 | 24.34 |
| AT5G60200.1 | Thale cress | nucleus | 19.87 | 23.74 |
| AT1G64620.1 | Thale cress | nucleus | 25.41 | 22.16 |
| AT5G65590.1 | Thale cress | nucleus | 22.8 | 22.15 |
| AT4G00940.2 | Thale cress | nucleus | 21.17 | 22.11 |
| TraesCS7B01G120600.1 | Wheat | nucleus | 22.8 | 21.94 |
| AT1G21340.1 | Thale cress | nucleus | 18.57 | 21.92 |
| AT2G37590.1 | Thale cress | nucleus | 23.45 | 21.82 |
| AT4G24060.1 | Thale cress | nucleus | 23.78 | 21.34 |
| AT2G28810.1 | Thale cress | nucleus | 23.13 | 20.88 |
| AT2G46590.2 | Thale cress | nucleus | 25.08 | 20.87 |
| AT3G61850.4 | Thale cress | nucleus | 21.82 | 20.68 |
| AT1G07640.3 | Thale cress | nucleus | 22.48 | 20.35 |
| AT3G52440.2 | Thale cress | nucleus | 17.59 | 20.3 |
| AT2G28510.1 | Thale cress | nucleus | 18.89 | 20.14 |
| AT1G28310.2 | Thale cress | nucleus | 21.5 | 19.7 |
| AT5G62940.1 | Thale cress | nucleus | 23.78 | 19.62 |
| AT3G55370.3 | Thale cress | nucleus | 22.8 | 19.02 |
| AT5G02460.1 | Thale cress | nucleus | 24.43 | 18.8 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:836206 | UniProt:A0A178UF84 | ProteinID:AED97386.1 | EMBL:AF155817 | ArrayExpress:AT5G60850 |
| EnsemblPlantsGene:AT5G60850 | RefSeq:AT5G60850 | TAIR:AT5G60850 | RefSeq:AT5G60850-TAIR-G | EnsemblPlants:AT5G60850.1 | TAIR:AT5G60850.1 |
| EMBL:AY056413 | EMBL:AY081709 | EMBL:AY085856 | ProteinID:BAB10105.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR003851 | RefSeq:NP_200893.1 |
| ProteinID:OAO92279.1 | Symbol:OBP4 | PFAM:PD007478 | PFAM:PF02701 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF74 | UniProt:Q8LDR0 | UniParc:UPI00000A34A8 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
Coordinates
chr5:+:24480291..24482163
Molecular Weight (calculated)
32742.6 Da
IEP (calculated)
7.046
GRAVY (calculated)
-0.639
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.