Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P10670_001 | Banana | nucleus | 58.97 | 48.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.13 | 45.52 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 23.59 | 28.57 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 25.13 | 27.07 |
| Zm00001d051700_P001 | Maize | mitochondrion | 33.85 | 26.09 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 39.49 | 25.08 |
| GSMUA_Achr10P... | Banana | nucleus | 36.41 | 24.32 |
| TraesCS6B01G317100.1 | Wheat | nucleus | 35.38 | 23.88 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 35.38 | 23.79 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 35.38 | 23.71 |
| Os02t0726300-01 | Rice | nucleus | 33.85 | 23.4 |
| CDX87189 | Canola | nucleus | 29.23 | 22.8 |
| Zm00001d017900_P001 | Maize | nucleus | 33.85 | 22.0 |
| KRH56758 | Soybean | nucleus | 32.82 | 21.92 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 25.13 | 21.88 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 33.85 | 21.85 |
| CDY16836 | Canola | nucleus | 29.74 | 21.72 |
| Bra035956.1-P | Field mustard | nucleus | 29.74 | 21.72 |
| KXG30845 | Sorghum | nucleus | 33.33 | 21.38 |
| KRH03180 | Soybean | nucleus | 32.31 | 21.0 |
| GSMUA_Achr11P... | Banana | nucleus | 28.72 | 20.59 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 33.33 | 20.5 |
| GSMUA_Achr11P... | Banana | nucleus | 27.69 | 20.38 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 22.56 | 20.28 |
| CDY40813 | Canola | nucleus | 29.23 | 20.14 |
| KRH54755 | Soybean | nucleus | 31.28 | 20.13 |
| Bra013003.1-P | Field mustard | nucleus | 30.26 | 20.07 |
| CDY02191 | Canola | nucleus | 30.26 | 20.07 |
| CDY42836 | Canola | nucleus | 29.23 | 19.93 |
| AT5G60850.1 | Thale cress | nucleus | 31.28 | 19.87 |
| Bra029352.1-P | Field mustard | nucleus | 28.21 | 19.78 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 31.79 | 19.5 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 27.18 | 19.49 |
| PGSC0003DMT400010397 | Potato | nucleus | 31.79 | 19.44 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 24.62 | 19.43 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 22.05 | 19.37 |
| GSMUA_Achr10P... | Banana | nucleus | 26.67 | 19.12 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 25.13 | 19.07 |
| GSMUA_Achr10P... | Banana | nucleus | 28.21 | 18.97 |
| GSMUA_Achr10P... | Banana | nucleus | 27.69 | 18.95 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 25.13 | 18.92 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 24.1 | 18.8 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 26.15 | 18.61 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 27.18 | 18.6 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 25.13 | 18.42 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 23.08 | 18.22 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 27.18 | 18.21 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 25.13 | 18.15 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 27.69 | 18.12 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 26.15 | 18.09 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 25.64 | 17.86 |
| GSMUA_Achr10P... | Banana | nucleus | 23.59 | 17.83 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 25.13 | 17.69 |
| GSMUA_Achr11P... | Banana | nucleus | 26.67 | 17.69 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 27.69 | 17.65 |
| KRH63162 | Soybean | nucleus | 30.77 | 17.6 |
| GSMUA_Achr11P... | Banana | nucleus | 26.67 | 17.57 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 26.15 | 17.47 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 30.26 | 17.35 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 22.56 | 17.12 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 24.1 | 17.09 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 28.21 | 16.57 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 27.18 | 16.06 |
| GSMUA_Achr10P... | Banana | nucleus | 27.69 | 16.02 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 27.18 | 15.96 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 25.64 | 15.34 |
| GSMUA_Achr10P... | Banana | nucleus | 27.18 | 15.23 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 26.67 | 14.65 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 25.64 | 14.58 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 27.18 | 14.56 |
| GSMUA_Achr11P... | Banana | nucleus | 26.67 | 14.48 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 26.15 | 14.09 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 28.21 | 12.73 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G23930_001 | EnsemblPlants:GSMUA_Achr5P23930_001 | EnsemblPlants:GSMUA_Achr5T23930_001 |
| InterPro:IPR003851 | UniProt:M0T168 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF71 | UniParc:UPI000295F1AA | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr5G23930_001]
Coordinates
chr5:-:25469608..25470444
Molecular Weight (calculated)
21201.9 Da
IEP (calculated)
6.496
GRAVY (calculated)
-0.438
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDFQPVTGG IFGGGVEHRR VVGYPAEVAR QQQQQQAVKC PRCNSANTKF CYYNNYNHSQ PRHFCKSCRR YWTMGGVLRN VPIGGGCRKA VTTATTSTLL
101: TSHMPISNNN PPFEPLPSHP QEEAAAAAAA AEVIRPGLID QTVPLDPGPG GGDLPALDWP EPADSALFDL TSAVDPVAYW NQSHWLDADP SLYLP
101: TSHMPISNNN PPFEPLPSHP QEEAAAAAAA AEVIRPGLID QTVPLDPGPG GGDLPALDWP EPADSALFDL TSAVDPVAYW NQSHWLDADP SLYLP
001: MQDIHDFSMN GVGGGGGGGG RFFGGGIGGG GGGDRRMRAH QNNILNHHQS LKCPRCNSLN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGV LRNVPVGGGC
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
101: RKAKRSKTKQ VPSSSSADKP TTTQDDHHVE EKSSTGSHSS SESSSLTASN STTVAAVSVT AAAEVASSVI PGFDMPNMKI YGNGIEWSTL LGQGSSAGGV
201: FSEIGGFPAV SAIETTPFGF GGKFVNQDDH LKLEGETVQQ QQFGDRTAQV EFQGRSSDPN MGFEPLDWGS GGGDQTLFDL TSTVDHAYWS QSQWTSSDQD
301: QSGLYLP
Arabidopsis Description
DOF5.4OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.