Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02600_001 | Banana | nucleus | 50.9 | 59.93 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 29.82 | 54.7 |
| GSMUA_Achr10P... | Banana | nucleus | 44.58 | 51.03 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 49.1 | 47.94 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 30.72 | 45.95 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 32.53 | 43.72 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 42.77 | 43.03 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 35.24 | 42.24 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 41.87 | 41.87 |
| GSMUA_Achr10P... | Banana | nucleus | 42.17 | 41.54 |
| GSMUA_Achr11P... | Banana | nucleus | 43.07 | 39.83 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 19.28 | 39.75 |
| PGSC0003DMT400078164 | Potato | nucleus | 36.75 | 38.12 |
| Solyc06g076030.2.1 | Tomato | nucleus | 36.14 | 35.93 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 21.99 | 29.2 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 23.19 | 28.52 |
| GSMUA_Achr10P... | Banana | nucleus | 22.89 | 27.94 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 15.96 | 27.18 |
| GSMUA_Achr11P... | Banana | nucleus | 21.69 | 27.17 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 19.28 | 27.0 |
| GSMUA_Achr11P... | Banana | nucleus | 23.8 | 26.87 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 20.78 | 26.85 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 21.99 | 26.84 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 18.07 | 26.79 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 23.8 | 26.51 |
| GSMUA_Achr10P... | Banana | nucleus | 22.59 | 26.32 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 21.69 | 25.71 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 19.88 | 25.68 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 20.48 | 25.56 |
| GSMUA_Achr11P... | Banana | nucleus | 22.29 | 25.0 |
| GSMUA_Achr11P... | Banana | nucleus | 20.48 | 25.0 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 21.69 | 24.66 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 20.78 | 24.21 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 19.88 | 24.09 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 15.66 | 23.96 |
| GSMUA_Achr10P... | Banana | nucleus | 18.37 | 23.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.58 | 23.3 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 22.29 | 22.7 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 19.88 | 22.68 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 24.4 | 22.25 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 18.37 | 22.18 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 17.17 | 22.01 |
| GSMUA_Achr10P... | Banana | nucleus | 19.28 | 21.92 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 16.27 | 21.86 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 23.8 | 21.82 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 19.88 | 21.5 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 21.99 | 21.28 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 19.58 | 21.24 |
| GSMUA_Achr10P... | Banana | nucleus | 21.99 | 20.98 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 18.37 | 20.2 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 21.39 | 20.0 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 18.67 | 19.56 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 22.59 | 17.36 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G34180_001 | EnsemblPlants:GSMUA_Achr6P34180_001 | EnsemblPlants:GSMUA_Achr6T34180_001 |
| InterPro:IPR003851 | UniProt:M0TCL1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI000294D509 | InterPro:Znf_Dof | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G34180_001]
Coordinates
chr6:-:32958015..32959217
Molecular Weight (calculated)
35698.3 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.358
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSSAPVYM DPPNWNQVSA NTTFFFFPFE LLIHWLLHQK SKLKGEDIRV LFLISSRIYH SGGEAPLLPP GLAGPPPEAG AAAAGSSRPL SMTERARVAK
101: IVQLPEHPLK CPRCDSTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NKRNKSSGSS SKSTATASTA DRQDGTSSSS CMATGAGGAI
201: PPSIPQPGQL PFLASMHGLA DYDASNLGLN FPGLPPMDAP DYHVGSNSSV GIEQWRLPQI QQLHLLGGSE PPQPPAVQLM PGLFHVNREG ERDSTAGRVF
301: PKLSGSSLIT QLSGDWATDL SAFNSSSSGN VL
101: IVQLPEHPLK CPRCDSTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NKRNKSSGSS SKSTATASTA DRQDGTSSSS CMATGAGGAI
201: PPSIPQPGQL PFLASMHGLA DYDASNLGLN FPGLPPMDAP DYHVGSNSSV GIEQWRLPQI QQLHLLGGSE PPQPPAVQLM PGLFHVNREG ERDSTAGRVF
301: PKLSGSSLIT QLSGDWATDL SAFNSSSSGN VL
001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.