Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P29110_001 | Banana | nucleus | 67.59 | 57.65 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 34.83 | 55.8 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 49.66 | 51.99 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 43.45 | 51.01 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 48.97 | 50.35 |
| GSMUA_Achr11P... | Banana | nucleus | 58.62 | 47.35 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 51.03 | 44.58 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 48.97 | 42.77 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 32.41 | 42.34 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 47.93 | 42.12 |
| GSMUA_Achr10P... | Banana | nucleus | 47.59 | 40.95 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 22.41 | 40.37 |
| PGSC0003DMT400078164 | Potato | nucleus | 42.07 | 38.12 |
| Solyc06g076030.2.1 | Tomato | nucleus | 41.38 | 35.93 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 22.76 | 29.46 |
| GSMUA_Achr11P... | Banana | nucleus | 29.31 | 28.91 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 24.83 | 28.8 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 25.17 | 28.4 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.97 | 28.21 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 28.97 | 28.19 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 25.52 | 27.82 |
| GSMUA_Achr11P... | Banana | nucleus | 25.86 | 27.57 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 22.41 | 27.43 |
| GSMUA_Achr10P... | Banana | nucleus | 24.14 | 27.13 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 25.17 | 27.04 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 25.17 | 26.84 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 23.45 | 26.25 |
| GSMUA_Achr10P... | Banana | nucleus | 24.48 | 26.1 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 25.86 | 25.68 |
| GSMUA_Achr11P... | Banana | nucleus | 23.45 | 25.66 |
| GSMUA_Achr10P... | Banana | nucleus | 25.17 | 25.61 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 24.14 | 25.55 |
| GSMUA_Achr11P... | Banana | nucleus | 25.52 | 25.0 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 24.83 | 24.74 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 23.79 | 24.64 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 21.72 | 24.51 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 18.28 | 24.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.45 | 24.37 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 23.1 | 24.36 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 23.79 | 24.21 |
| GSMUA_Achr10P... | Banana | nucleus | 24.14 | 23.97 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 20.34 | 23.89 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 28.62 | 23.38 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 29.31 | 23.35 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 28.62 | 22.93 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 24.14 | 22.88 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 25.17 | 22.39 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 23.45 | 22.15 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 25.86 | 21.87 |
| GSMUA_Achr10P... | Banana | nucleus | 24.48 | 20.4 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 20.69 | 19.87 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 21.38 | 19.56 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 25.52 | 17.13 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G03660_001 | EnsemblPlants:GSMUA_Achr10P03660_001 | EnsemblPlants:GSMUA_Achr10T03660_001 |
| InterPro:IPR003851 | UniProt:M0RF43 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0002948248 | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Dof zinc finger protein DOF3.6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G03660_001]
Coordinates
chr10:-:11901459..11903032
Molecular Weight (calculated)
30760.9 Da
IEP (calculated)
9.392
GRAVY (calculated)
-0.513
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSVPAYM DPPNWNQLLP GLAAAQRPEG GTVAAGLARP ISMAERARLA KIPQPEQPLK CPRCDSTNTK FCYFNNYSLS QPRHFCKTCR RYWTRGGALR
101: NVPVGGGCRR NKRSKSSGSS SKSTTADRQA GNSSSSSTAT GRGGALPPNI PQPGQLPFLA SMHTFADYGA SNPSLNFTGI PTIDADEYQM GSISGPPAVQ
201: SLSELYHFTG EGGGDSTMNR VLPKLPASSL ITQLASVKME DNSQGLNLPR QYSGLTANDQ YWSSAGEAGS TSGGGWTTDF FNSSSSGNIL
101: NVPVGGGCRR NKRSKSSGSS SKSTTADRQA GNSSSSSTAT GRGGALPPNI PQPGQLPFLA SMHTFADYGA SNPSLNFTGI PTIDADEYQM GSISGPPAVQ
201: SLSELYHFTG EGGGDSTMNR VLPKLPASSL ITQLASVKME DNSQGLNLPR QYSGLTANDQ YWSSAGEAGS TSGGGWTTDF FNSSSSGNIL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.