Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02840_001 | Banana | nucleus | 65.56 | 64.5 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 62.91 | 59.94 |
| GSMUA_Achr10P... | Banana | nucleus | 57.28 | 59.25 |
| Solyc02g090310.1.1 | Tomato | nucleus | 35.1 | 40.77 |
| PGSC0003DMT400025984 | Potato | nucleus | 35.43 | 38.21 |
| KRH76935 | Soybean | nucleus | 39.07 | 35.12 |
| KRH04709 | Soybean | nucleus | 40.07 | 34.38 |
| KRH28526 | Soybean | nucleus | 38.41 | 34.22 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 21.85 | 33.85 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 39.07 | 33.52 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 24.83 | 31.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.15 | 29.39 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 15.56 | 29.19 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 16.89 | 28.18 |
| CDY08775 | Canola | nucleus | 18.21 | 28.06 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 18.87 | 25.45 |
| Zm00001d034163_P001 | Maize | nucleus | 29.8 | 24.93 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 18.87 | 24.57 |
| Os03t0764900-01 | Rice | nucleus | 29.14 | 24.51 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.22 | 23.96 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 17.55 | 23.87 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 29.8 | 23.62 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 29.47 | 23.42 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 29.47 | 23.3 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 20.86 | 23.16 |
| KXG37485 | Sorghum | nucleus | 29.14 | 23.16 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 18.87 | 23.08 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 28.15 | 23.04 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 19.54 | 22.96 |
| CDY70312 | Canola | nucleus | 21.52 | 22.89 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 18.87 | 22.8 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 29.14 | 22.8 |
| Bra037822.1-P | Field mustard | nucleus | 21.19 | 22.54 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 20.86 | 22.5 |
| CDY70838 | Canola | nucleus | 22.19 | 21.9 |
| CDX81292 | Canola | nucleus | 20.2 | 21.63 |
| AT5G65590.1 | Thale cress | nucleus | 22.52 | 21.52 |
| GSMUA_Achr11P... | Banana | nucleus | 19.21 | 21.32 |
| GSMUA_Achr10P... | Banana | nucleus | 18.21 | 21.32 |
| Bra024399.1-P | Field mustard | nucleus | 21.52 | 21.24 |
| GSMUA_Achr11P... | Banana | nucleus | 18.54 | 21.13 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 18.87 | 21.11 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 19.87 | 21.05 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 20.2 | 20.96 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 19.21 | 20.94 |
| CDY33948 | Canola | nucleus | 20.86 | 20.86 |
| GSMUA_Achr11P... | Banana | nucleus | 20.2 | 20.75 |
| Bra031853.1-P | Field mustard | nucleus | 20.86 | 20.72 |
| GSMUA_Achr10P... | Banana | nucleus | 19.87 | 20.69 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 18.21 | 20.68 |
| CDY37834 | Canola | nucleus | 20.53 | 20.39 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 19.87 | 20.13 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 18.21 | 20.0 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 17.88 | 19.71 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 19.87 | 19.61 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 18.21 | 19.5 |
| GSMUA_Achr10P... | Banana | nucleus | 17.55 | 19.49 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 16.56 | 19.46 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 15.89 | 19.43 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 18.54 | 19.18 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 21.52 | 19.12 |
| GSMUA_Achr10P... | Banana | nucleus | 17.88 | 18.95 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 15.89 | 18.53 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 20.2 | 18.37 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 20.2 | 18.37 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 19.87 | 18.18 |
| GSMUA_Achr11P... | Banana | nucleus | 21.52 | 18.11 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 20.53 | 18.08 |
| GSMUA_Achr11P... | Banana | nucleus | 17.55 | 17.91 |
| GSMUA_Achr10P... | Banana | nucleus | 19.87 | 17.8 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 19.21 | 17.79 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 21.19 | 17.68 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 20.53 | 17.03 |
| GSMUA_Achr10P... | Banana | nucleus | 19.54 | 16.95 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 18.87 | 16.06 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 21.85 | 15.28 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G09650_001 | EnsemblPlants:GSMUA_Achr9P09650_001 | EnsemblPlants:GSMUA_Achr9T09650_001 |
| InterPro:IPR003851 | UniProt:M0TYX4 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF70 | UniParc:UPI0002955F65 | InterPro:Znf_Dof | SEG:seg | : |
Description
dof zinc finger domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G09650_001]
Coordinates
chr9:-:6270520..6271557
Molecular Weight (calculated)
32241.9 Da
IEP (calculated)
8.904
GRAVY (calculated)
-0.376
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MEERKNSYPG GLLIDPSSSS PTSPVSSKSR SSSSPSLSSI TADQQQQKNL RCPRCDSTNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR
101: KTRAVVAIAA PGICAKSAGA TKTRPASPDL VLRSGLVGGL ENELSSTLWP SPHPSHLISL LRSSSLQNPN TILHSTPSLH LNSAIIDEDK TLLGSHTVAD
201: PGSTPNSYSP SLEALSQLAL DLYQKFKSSA NYHNEQLQTV MSNVGSFGSS CSSTASLMTM AGTLTNATAP IMDHIPLSAG EFGNWNPGLA WSDLPTLNGA
301: FH
101: KTRAVVAIAA PGICAKSAGA TKTRPASPDL VLRSGLVGGL ENELSSTLWP SPHPSHLISL LRSSSLQNPN TILHSTPSLH LNSAIIDEDK TLLGSHTVAD
201: PGSTPNSYSP SLEALSQLAL DLYQKFKSSA NYHNEQLQTV MSNVGSFGSS CSSTASLMTM AGTLTNATAP IMDHIPLSAG EFGNWNPGLA WSDLPTLNGA
301: FH
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.