Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G406500.1 | Wheat | nucleus | 90.16 | 91.1 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 89.9 | 91.08 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 89.64 | 91.05 |
| Os03t0764900-01 | Rice | nucleus | 65.28 | 70.19 |
| KXG37485 | Sorghum | nucleus | 61.92 | 62.89 |
| Zm00001d034163_P001 | Maize | nucleus | 58.29 | 62.33 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 20.21 | 33.62 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 24.61 | 30.94 |
| GSMUA_Achr10P... | Banana | nucleus | 23.32 | 30.82 |
| CDY08775 | Canola | nucleus | 15.29 | 30.1 |
| HORVU7Hr1G043250.2 | Barley | nucleus | 22.02 | 29.93 |
| KRH76935 | Soybean | nucleus | 25.65 | 29.46 |
| Solyc02g090310.1.1 | Tomato | nucleus | 19.69 | 29.23 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 22.8 | 29.14 |
| KRH28526 | Soybean | nucleus | 24.87 | 28.32 |
| PGSC0003DMT400025984 | Potato | nucleus | 20.47 | 28.21 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 25.65 | 28.12 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 22.54 | 27.44 |
| KRH04709 | Soybean | nucleus | 24.35 | 26.7 |
| CDY70838 | Canola | nucleus | 17.88 | 22.55 |
| CDY70312 | Canola | nucleus | 16.58 | 22.54 |
| Bra037822.1-P | Field mustard | nucleus | 16.58 | 22.54 |
| Bra031853.1-P | Field mustard | nucleus | 17.36 | 22.04 |
| CDX81292 | Canola | nucleus | 16.06 | 21.99 |
| CDY33948 | Canola | nucleus | 17.1 | 21.85 |
| CDY37834 | Canola | nucleus | 17.1 | 21.71 |
| AT5G65590.1 | Thale cress | nucleus | 17.36 | 21.2 |
| Bra024399.1-P | Field mustard | nucleus | 16.32 | 20.59 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 15.03 | 20.28 |
| HORVU5Hr1G021290.1 | Barley | nucleus | 17.36 | 19.42 |
| HORVU3Hr1G083460.1 | Barley | nucleus | 16.32 | 19.03 |
| HORVU3Hr1G116260.1 | Barley | nucleus | 15.29 | 18.73 |
| HORVU2Hr1G013060.1 | Barley | nucleus, plastid | 14.25 | 18.46 |
| HORVU3Hr1G116270.2 | Barley | nucleus | 16.06 | 17.82 |
| HORVU1Hr1G074140.1 | Barley | nucleus, vacuole | 15.8 | 17.73 |
| HORVU1Hr1G005390.2 | Barley | nucleus | 16.58 | 17.53 |
| HORVU5Hr1G048700.1 | Barley | nucleus | 15.03 | 17.42 |
| HORVU3Hr1G116220.1 | Barley | nucleus, plastid | 16.58 | 16.12 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 18.65 | 16.0 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 18.91 | 15.53 |
| HORVU2Hr1G047750.4 | Barley | plastid | 4.66 | 7.96 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 4.4 | 7.69 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A287SFI8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G097620 | EnsemblPlants:HORVU5Hr1G097620.1 |
| InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 |
| PANTHER:PTHR31992:SF70 | UniParc:UPI000B46225F | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:+:605046252..605048334
Molecular Weight (calculated)
40240.8 Da
IEP (calculated)
9.289
GRAVY (calculated)
-0.441
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQELLGGTA MDQHQLQQLK CAGNAVNHHG HGSLPMVLQP ISSNPSPTSS STSSRSSTQR SPSATSSPQG QGQQGPPGQE QPPLRCPRCN SSNTKFCYYN
101: NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGCRKPRPMP APVAKAQPSS CKSMLSMAVA TAPSLGLGMG VGGGMSWASA PQTATAQLMA LLNSARAGYT
201: GSNMHRLLGL DTMGQLQIMP GSANGGPGMS PSLWSQTTQR PTMPPPAMHL DSHLSMGSLG LGQGHGHHNL LSGLELKPPS SSPSPSSLAA SYYSDQLNAV
301: VSNGGAGRPH PYDSPASSYP CSTAMCALPP SASTVSAAPS SHSVGMEQQP PAMSLGTQEM QMQYWSGGPA SMMSWPDLPT LNGTFP
101: NYNLTQPRHF CKTCRRYWTK GGALRNVPIG GGCRKPRPMP APVAKAQPSS CKSMLSMAVA TAPSLGLGMG VGGGMSWASA PQTATAQLMA LLNSARAGYT
201: GSNMHRLLGL DTMGQLQIMP GSANGGPGMS PSLWSQTTQR PTMPPPAMHL DSHLSMGSLG LGQGHGHHNL LSGLELKPPS SSPSPSSLAA SYYSDQLNAV
301: VSNGGAGRPH PYDSPASSYP CSTAMCALPP SASTVSAAPS SHSVGMEQQP PAMSLGTQEM QMQYWSGGPA SMMSWPDLPT LNGTFP
001: MPTNSNHQHH LQHQLNENGS IISGHGLVLS HQLPPLQANP NPNHHHVATS AGLPSRMGGS MAERARQANI PPLAGPLKCP RCDSSNTKFC YYNNYNLTQP
101: RHFCKGCRRY WTQGGALRNV PVGGGCRRNN KKGKNGNLKS SSSSSKQSSS VNAQSPSSGQ LRTNHQFPFS PTLYNLTQLG GIGLNLAATN GNNQAHQIGS
201: SLMMSDLGFL HGRNTSTPMT GNIHENNNNN NNENNLMASV GSLSPFALFD PTTGLYAFQN DGNIGNNVGI SGSSTSMVDS RVYQTPPVKM EEQPNLANLS
301: RPVSGLTSPG NQTNQYFWPG SDFSGPSNDL L
101: RHFCKGCRRY WTQGGALRNV PVGGGCRRNN KKGKNGNLKS SSSSSKQSSS VNAQSPSSGQ LRTNHQFPFS PTLYNLTQLG GIGLNLAATN GNNQAHQIGS
201: SLMMSDLGFL HGRNTSTPMT GNIHENNNNN NNENNLMASV GSLSPFALFD PTTGLYAFQN DGNIGNNVGI SGSSTSMVDS RVYQTPPVKM EEQPNLANLS
301: RPVSGLTSPG NQTNQYFWPG SDFSGPSNDL L
Arabidopsis Description
OBP2Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4Q1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.