Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28526 | Soybean | nucleus | 59.09 | 61.36 |
| KRH76935 | Soybean | nucleus | 58.24 | 61.01 |
| KRH04709 | Soybean | nucleus | 59.09 | 59.09 |
| Solyc02g090310.1.1 | Tomato | nucleus | 38.64 | 52.31 |
| PGSC0003DMT400025984 | Potato | nucleus | 39.49 | 49.64 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 40.06 | 45.93 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 39.49 | 43.85 |
| GSMUA_Achr10P... | Banana | nucleus | 35.51 | 42.81 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 33.52 | 39.07 |
| CDY08775 | Canola | nucleus | 16.19 | 29.08 |
| Zm00001d034163_P001 | Maize | nucleus | 29.55 | 28.81 |
| Os03t0764900-01 | Rice | nucleus | 28.69 | 28.13 |
| KXG37485 | Sorghum | nucleus | 29.26 | 27.11 |
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 21.88 | 26.83 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 27.84 | 26.56 |
| VIT_02s0025g02250.t01 | Wine grape | nucleus | 21.31 | 26.04 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 17.05 | 25.86 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 27.84 | 25.79 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 27.84 | 25.72 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 27.84 | 25.65 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 28.12 | 25.65 |
| CDY70312 | Canola | nucleus | 19.32 | 23.94 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 21.59 | 23.75 |
| Bra037822.1-P | Field mustard | nucleus | 19.03 | 23.59 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 20.45 | 23.38 |
| CDY70838 | Canola | nucleus | 20.17 | 23.2 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 19.32 | 22.97 |
| Bra024399.1-P | Field mustard | nucleus | 19.89 | 22.88 |
| AT5G65590.1 | Thale cress | nucleus | 20.45 | 22.78 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 21.59 | 22.55 |
| CDX81292 | Canola | nucleus | 17.9 | 22.34 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 21.31 | 22.19 |
| CDY33948 | Canola | nucleus | 19.03 | 22.19 |
| VIT_10s0003g00030.t01 | Wine grape | nucleus | 18.75 | 22.07 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 19.89 | 22.01 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 16.76 | 21.85 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 19.6 | 21.84 |
| Bra031853.1-P | Field mustard | nucleus | 18.75 | 21.71 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 18.18 | 21.69 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 21.02 | 21.45 |
| CDY37834 | Canola | nucleus | 18.47 | 21.38 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 17.05 | 19.48 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 15.06 | 18.86 |
Protein Annotations
| EntrezGene:100244391 | wikigene:100244391 | MapMan:15.5.1.5 | ProteinID:CCB45146 | ProteinID:CCB45146.1 | UniProt:F6GYW0 |
| EMBL:FN594975 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EntrezGene:LOC100244391 | wikigene:LOC100244391 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF70 |
| UniParc:UPI000210A32B | ArrayExpress:VIT_00s0253g00060 | EnsemblPlantsGene:VIT_00s0253g00060 | EnsemblPlants:VIT_00s0253g00060.t01 | RefSeq:XP_003635142 | RefSeq:XP_003635142.1 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:17750019..17752319
Molecular Weight (calculated)
37024.0 Da
IEP (calculated)
8.654
GRAVY (calculated)
-0.440
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQELLGGGA GLIGGERKIT INGGILEASP SPSPSPSPSS SSSGNTTTVT TAAAATTSSA SENLRCPRCD SSNTKFCYYN NYNLTQPRHF CKTCRRYWTK
101: GGALRNVPIG GGCRKNKNTS VSTAVGKSSA GKAKSAVSEI GKSGLGGGFD HEIPSNPILW ASPQNSHLLA LLRATQNPNP NPSPISNSVT VKDDGVMIGS
201: HMTSESGVGT GAVNIARNMG LDHLNQLPSI GLCSSYWRNN QHQTQQHQQN SHHQQQNGFI LGEVQNTGIQ ELYQRLRSST NYYTDHSPVV LSNAVSSSSS
301: ILESAPIAGV LSNAVSSSSS ILESAPIAGG ELGYWNPTFS WSDLPTTNGA YP
101: GGALRNVPIG GGCRKNKNTS VSTAVGKSSA GKAKSAVSEI GKSGLGGGFD HEIPSNPILW ASPQNSHLLA LLRATQNPNP NPSPISNSVT VKDDGVMIGS
201: HMTSESGVGT GAVNIARNMG LDHLNQLPSI GLCSSYWRNN QHQTQQHQQN SHHQQQNGFI LGEVQNTGIQ ELYQRLRSST NYYTDHSPVV LSNAVSSSSS
301: ILESAPIAGV LSNAVSSSSS ILESAPIAGG ELGYWNPTFS WSDLPTTNGA YP
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.