Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24943 | Soybean | nucleus | 73.31 | 71.15 |
| KRG89059 | Soybean | nucleus | 72.3 | 69.03 |
| PGSC0003DMT400019416 | Potato | nucleus | 59.46 | 58.28 |
| Solyc06g075370.2.1 | Tomato | nucleus | 59.46 | 58.09 |
| Solyc11g072500.1.1 | Tomato | nucleus | 52.03 | 54.04 |
| PGSC0003DMT400065271 | Potato | nucleus | 53.38 | 52.84 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 47.3 | 51.47 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 48.65 | 49.48 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 43.24 | 46.72 |
| GSMUA_Achr11P... | Banana | nucleus | 30.07 | 33.58 |
| GSMUA_Achr10P... | Banana | nucleus | 31.42 | 32.63 |
| VIT_16s0098g01420.t01 | Wine grape | nucleus | 31.08 | 32.06 |
| GSMUA_Achr10P... | Banana | nucleus | 29.39 | 31.99 |
| CDY53379 | Canola | nucleus | 23.65 | 31.96 |
| VIT_02s0025g02250.t01 | Wine grape | nucleus | 30.41 | 31.25 |
| GSMUA_Achr11P... | Banana | nucleus | 30.07 | 30.07 |
| CDX77184 | Canola | nucleus | 25.0 | 28.91 |
| Bra035696.1-P | Field mustard | nucleus | 24.66 | 28.52 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 28.72 | 27.6 |
| VIT_10s0003g00030.t01 | Wine grape | nucleus | 27.7 | 27.42 |
| VIT_08s0105g00170.t01 | Wine grape | nucleus | 24.66 | 27.04 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 30.74 | 27.0 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 28.38 | 26.58 |
| VIT_06s0004g04520.t01 | Wine grape | nucleus | 28.04 | 25.94 |
| PGSC0003DMT400075051 | Potato | nucleus | 25.0 | 25.43 |
| AT2G28510.1 | Thale cress | nucleus | 23.99 | 24.65 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 24.32 | 24.41 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 28.38 | 24.35 |
| Solyc06g005130.2.1 | Tomato | nucleus | 24.66 | 23.7 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 23.65 | 22.73 |
| VIT_18s0001g15730.t01 | Wine grape | nucleus | 21.28 | 22.42 |
| VIT_17s0000g04850.t01 | Wine grape | nucleus | 22.97 | 21.38 |
| VIT_00s0218g00040.t01 | Wine grape | nucleus | 22.64 | 19.82 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 22.97 | 19.32 |
Protein Annotations
| EntrezGene:100243211 | wikigene:100243211 | MapMan:15.5.1.5 | ProteinID:CCB43637 | ProteinID:CCB43637.1 | UniProt:F6GTX3 |
| EMBL:FN594951 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EntrezGene:LOC100243211 | wikigene:LOC100243211 |
| PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 |
| UniParc:UPI000210A5F3 | ArrayExpress:VIT_06s0004g03420 | EnsemblPlantsGene:VIT_06s0004g03420 | EnsemblPlants:VIT_06s0004g03420.t01 | RefSeq:XP_002284859 | RefSeq:XP_002284859.2 |
| RefSeq:XP_002284859.3 | InterPro:Znf_Dof | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6:-:4265287..4267184
Molecular Weight (calculated)
32604.1 Da
IEP (calculated)
7.141
GRAVY (calculated)
-0.746
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MDASSAQRQE MDTQSLESML VCSKAQQERK PRPPEQALKC PRCDSTNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRKN KRSSSSSSSK
101: RTQDQPLTTN PNPLNVLPPL TYDSNDLTLA FARLQKQTGG QLGYDDHHHD LALMGNPNNT HCDVLGNQCV NTCGTTTPGL LDALRTNFLE TPSGYHNLYY
201: GFGNGGMGGE VENGGVGGEH MVLPYEEMSG ATTTAVTVTT MKQELCHGRE GENRVLWGFP WQQLNPDGSM GEVDSGRESW NGLASSWHGL LNSPLM
101: RTQDQPLTTN PNPLNVLPPL TYDSNDLTLA FARLQKQTGG QLGYDDHHHD LALMGNPNNT HCDVLGNQCV NTCGTTTPGL LDALRTNFLE TPSGYHNLYY
201: GFGNGGMGGE VENGGVGGEH MVLPYEEMSG ATTTAVTVTT MKQELCHGRE GENRVLWGFP WQQLNPDGSM GEVDSGRESW NGLASSWHGL LNSPLM
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.