Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065271 | Potato | nucleus | 90.18 | 85.95 |
| Solyc06g075370.2.1 | Tomato | nucleus | 58.25 | 54.79 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 54.04 | 52.03 |
| KRG89059 | Soybean | nucleus | 53.68 | 49.35 |
| KRH24943 | Soybean | nucleus | 52.63 | 49.18 |
| KRH22943 | Soybean | nucleus | 46.67 | 46.67 |
| KRH10402 | Soybean | nucleus | 46.32 | 46.32 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 40.0 | 41.91 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 38.95 | 38.14 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 30.88 | 32.12 |
| CDY53379 | Canola | nucleus | 22.81 | 29.68 |
| Solyc10g009360.2.1 | Tomato | nucleus | 26.32 | 28.74 |
| Solyc03g082840.2.1 | Tomato | nucleus | 24.91 | 27.52 |
| GSMUA_Achr11P... | Banana | nucleus | 25.26 | 27.17 |
| GSMUA_Achr10P... | Banana | nucleus | 25.61 | 26.84 |
| GSMUA_Achr10P... | Banana | nucleus | 26.67 | 26.67 |
| Solyc01g096120.2.1 | Tomato | nucleus | 25.26 | 26.09 |
| Bra035696.1-P | Field mustard | nucleus | 23.16 | 25.78 |
| CDX77184 | Canola | nucleus | 23.16 | 25.78 |
| Solyc06g071480.2.1 | Tomato | nucleus | 24.21 | 24.73 |
| Solyc02g077960.1.1 | Tomato | nucleus | 25.26 | 24.08 |
| Solyc04g070960.1.1 | Tomato | nucleus | 22.46 | 23.97 |
| Solyc02g090310.1.1 | Tomato | nucleus | 21.75 | 23.85 |
| GSMUA_Achr11P... | Banana | nucleus | 24.56 | 23.65 |
| Solyc03g112930.2.1 | Tomato | nucleus | 27.02 | 23.12 |
| Solyc06g005130.2.1 | Tomato | nucleus | 24.91 | 23.05 |
| Solyc08g082910.1.1 | Tomato | nucleus | 25.26 | 22.64 |
| AT2G28510.1 | Thale cress | nucleus | 22.46 | 22.22 |
| Solyc05g054510.1.1 | Tomato | nucleus | 21.75 | 20.81 |
| Solyc06g076030.2.1 | Tomato | nucleus | 22.81 | 19.46 |
| Solyc02g078620.1.1 | Tomato | nucleus | 18.95 | 19.01 |
| Solyc10g086440.1.1 | Tomato | nucleus | 23.16 | 18.23 |
| Solyc11g066050.1.1 | Tomato | nucleus | 20.35 | 18.18 |
| Solyc02g077950.1.1 | Tomato | nucleus | 23.16 | 17.41 |
| Solyc11g010940.1.1 | Tomato | nucleus | 22.11 | 16.8 |
| Solyc09g010680.2.1 | Tomato | nucleus | 23.16 | 16.58 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4DAV7 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | EnsemblPlantsGene:Solyc11g072500.1 |
| EnsemblPlants:Solyc11g072500.1.1 | UniParc:UPI0002769CB5 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:+:55697591..55699228
Molecular Weight (calculated)
32421.7 Da
IEP (calculated)
7.473
GRAVY (calculated)
-0.970
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MCIMDHHQQE MTSQTLESML VCAKPDQDQK KPRPAAAEQQ PQKCPRCDSA NTKFCYYNNY SLTQPRYFCK SCRRYWTKGG TLRNVPVGGG CRKNRKLSSA
101: KRSSQDNISP NSSNSSTDLS LAFARLQKQT NAIDQEQDTN NNMSMMYNTN NDNTSTTFLD ALRGGFLENH HGLFQHNMYN YANMGQLVEN GEMGLSYDQD
201: QMSIGTMMTT TMKQEMCNVA RSTEGHDLND NNKVLWGFPW QQMSGDHHVN NNMNTNDFEY STNKQSWNGF GGSSNWHGLI NSPLM
101: KRSSQDNISP NSSNSSTDLS LAFARLQKQT NAIDQEQDTN NNMSMMYNTN NDNTSTTFLD ALRGGFLENH HGLFQHNMYN YANMGQLVEN GEMGLSYDQD
201: QMSIGTMMTT TMKQEMCNVA RSTEGHDLND NNKVLWGFPW QQMSGDHHVN NNMNTNDFEY STNKQSWNGF GGSSNWHGLI NSPLM
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.