Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048612 | Potato | nucleus | 91.57 | 88.19 |
| Solyc01g096120.2.1 | Tomato | nucleus | 55.94 | 52.9 |
| Solyc03g082840.2.1 | Tomato | nucleus | 40.61 | 41.09 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 25.29 | 40.99 |
| VIT_15s0046g00150.t01 | Wine grape | nucleus | 49.04 | 40.51 |
| Solyc08g082910.1.1 | Tomato | nucleus | 42.15 | 34.59 |
| GSMUA_Achr11P... | Banana | nucleus | 38.31 | 34.01 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 28.35 | 28.79 |
| Solyc11g072500.1.1 | Tomato | nucleus | 28.74 | 26.32 |
| Solyc06g071480.2.1 | Tomato | nucleus | 26.82 | 25.09 |
| Solyc06g075370.2.1 | Tomato | nucleus | 27.59 | 23.76 |
| Solyc04g070960.1.1 | Tomato | nucleus | 22.22 | 21.72 |
| Solyc02g077960.1.1 | Tomato | nucleus | 24.14 | 21.07 |
| Solyc03g112930.2.1 | Tomato | nucleus | 26.82 | 21.02 |
| Solyc02g090310.1.1 | Tomato | nucleus | 20.69 | 20.77 |
| Solyc06g005130.2.1 | Tomato | nucleus | 22.99 | 19.48 |
| Solyc02g077950.1.1 | Tomato | nucleus | 27.97 | 19.26 |
| Solyc05g054510.1.1 | Tomato | nucleus | 21.46 | 18.79 |
| Solyc06g076030.2.1 | Tomato | nucleus | 23.37 | 18.26 |
| Solyc11g010940.1.1 | Tomato | nucleus | 26.05 | 18.13 |
| Solyc02g078620.1.1 | Tomato | nucleus | 19.54 | 17.96 |
| Solyc09g010680.2.1 | Tomato | nucleus | 24.52 | 16.08 |
| Solyc10g086440.1.1 | Tomato | nucleus | 22.22 | 16.02 |
| Solyc11g066050.1.1 | Tomato | nucleus | 19.54 | 15.99 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4CYB2 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | EnsemblPlantsGene:Solyc10g009360.2 |
| EnsemblPlants:Solyc10g009360.2.1 | UniParc:UPI000276BDA8 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr10:-:3424646..3426235
Molecular Weight (calculated)
28542.2 Da
IEP (calculated)
9.441
GRAVY (calculated)
-0.682
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQIAPPNV TCSRTSTTME KKVRPQKDQV VNCPRCNSTN TKFCYYNNYS LTQPRYFCKT CRRYWTEGGT LRNVPVGGGS RKNRRCSISS SSLSSISSSQ
101: KLLDLNPNPS LSSLQNPNYN LNLGSNQDLN LGFPSFNIHN HNNYFRGMPQ FLDFPKMDKG NNGINHFSTS TSNTSPVSAL DLLQKGIASR GLTASISSSS
201: SPSTPDLNAL YTSSEVQENG AKMMLPFGCL NNHNNSESKG QENSSSVGFW NDGMLGGGGT W
101: KLLDLNPNPS LSSLQNPNYN LNLGSNQDLN LGFPSFNIHN HNNYFRGMPQ FLDFPKMDKG NNGINHFSTS TSNTSPVSAL DLLQKGIASR GLTASISSSS
201: SPSTPDLNAL YTSSEVQENG AKMMLPFGCL NNHNNSESKG QENSSSVGFW NDGMLGGGGT W
001: MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT METRKARPQE KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
101: SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL NLLSFPVMQD HHHHGMSHFF HMPKIENNNT SSSIYASSSP VSALELLRSN
201: GVSSRGMNTF LPGQMMDSNS VLYSSLGFPT MPDYKQSNNN LSFSIDHHQG IGHNTINSNQ RAQDNNDDMN GASRVLFPFS DMKELSSTTQ EKSHGNNTYW
301: NGMFSNTGGS SW
Arabidopsis Description
DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.