Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076447 | Potato | nucleus | 91.82 | 87.44 |
| KRH21402 | Soybean | nucleus | 40.63 | 43.14 |
| KRH10907 | Soybean | nucleus | 38.79 | 41.64 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 25.59 | 31.49 |
| Solyc10g009360.2.1 | Tomato | nucleus | 19.26 | 27.97 |
| GSMUA_Achr10P... | Banana | nucleus | 25.33 | 27.59 |
| Solyc01g096120.2.1 | Tomato | nucleus | 19.26 | 26.45 |
| Solyc03g082840.2.1 | Tomato | nucleus | 17.68 | 25.97 |
| CDY72049 | Canola | nucleus | 19.26 | 24.58 |
| Bra030089.1-P | Field mustard | nucleus | 19.26 | 24.5 |
| Bra032891.1-P | Field mustard | nucleus | 19.0 | 24.24 |
| CDY70666 | Canola | nucleus | 19.0 | 24.24 |
| Solyc06g075370.2.1 | Tomato | nucleus | 19.26 | 24.09 |
| Solyc08g082910.1.1 | Tomato | nucleus | 19.79 | 23.58 |
| Solyc05g054510.1.1 | Tomato | nucleus | 18.47 | 23.49 |
| Bra010884.1-P | Field mustard | nucleus | 18.21 | 23.39 |
| Solyc11g072500.1.1 | Tomato | nucleus | 17.41 | 23.16 |
| Solyc02g090310.1.1 | Tomato | nucleus | 15.83 | 23.08 |
| Solyc06g076030.2.1 | Tomato | nucleus | 20.32 | 23.05 |
| AT1G28310.2 | Thale cress | nucleus | 19.79 | 22.39 |
| CDY15678 | Canola | nucleus | 19.26 | 22.32 |
| CDX90142 | Canola | nucleus | 18.47 | 22.15 |
| CDY35729 | Canola | nucleus | 17.41 | 22.07 |
| CDY66590 | Canola | nucleus | 19.0 | 22.02 |
| EER97271 | Sorghum | nucleus | 20.05 | 21.47 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 20.05 | 21.41 |
| Solyc06g071480.2.1 | Tomato | nucleus | 15.57 | 21.15 |
| Solyc02g078620.1.1 | Tomato | nucleus | 15.83 | 21.13 |
| Solyc09g010680.2.1 | Tomato | nucleus | 22.16 | 21.11 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 19.79 | 21.07 |
| Zm00001d021591_P001 | Maize | nucleus | 19.79 | 20.83 |
| Zm00001d006463_P001 | Maize | plastid | 19.26 | 20.8 |
| Solyc04g070960.1.1 | Tomato | nucleus | 14.51 | 20.6 |
| Solyc11g010940.1.1 | Tomato | nucleus | 20.32 | 20.53 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 19.26 | 20.51 |
| Solyc02g077960.1.1 | Tomato | nucleus | 15.83 | 20.07 |
| Solyc11g066050.1.1 | Tomato | nucleus | 16.89 | 20.06 |
| Solyc03g112930.2.1 | Tomato | nucleus | 16.62 | 18.92 |
| Solyc06g005130.2.1 | Tomato | nucleus | 15.3 | 18.83 |
| Solyc10g086440.1.1 | Tomato | nucleus | 17.94 | 18.78 |
Protein Annotations
| MapMan:15.5.1.5 | ProteinID:ABH07906.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniProt:Q0PY33 |
| EnsemblPlantsGene:Solyc02g077950.1 | EnsemblPlants:Solyc02g077950.1.1 | UniParc:UPI0000DBE2BA | InterPro:Znf_Dof | SEG:seg | : |
Description
Dof zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0PY33]
Coordinates
chr2:+:42770876..42772015
Molecular Weight (calculated)
41591.0 Da
IEP (calculated)
8.128
GRAVY (calculated)
-0.787
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSNGTNAAT SNNMEKPIQD PSQQQQQQPP PHLKCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKNKRIKR PSVNSSSSTT
101: TTSHDIITTS TPNIVNPSHH HQLHHGVVHN NIDHLSTTNS QNHLNPLFYG LTHERSDLNI PFARLFNSRV SSHAGGVDPE GQVYSLTDNI PGLMDRRMGL
201: GFSNSSGGVV NMGHENNNNN NNSSSSNYGH GGFNPIKQIQ DVHVMSTSNC TTSTTSLLSS YPNMFGSSSS TSTMASLIAS SLQQQKFMSN INGNSFHSLL
301: TPNNYEELQM SRGENNNTNI NNVHEGGGNG ITMLKEEKMD LSNHQIHEQI INSSDPSLSW NGAWLDPSNM GSNSVPSLI
101: TTSHDIITTS TPNIVNPSHH HQLHHGVVHN NIDHLSTTNS QNHLNPLFYG LTHERSDLNI PFARLFNSRV SSHAGGVDPE GQVYSLTDNI PGLMDRRMGL
201: GFSNSSGGVV NMGHENNNNN NNSSSSNYGH GGFNPIKQIQ DVHVMSTSNC TTSTTSLLSS YPNMFGSSSS TSTMASLIAS SLQQQKFMSN INGNSFHSLL
301: TPNNYEELQM SRGENNNTNI NNVHEGGGNG ITMLKEEKMD LSNHQIHEQI INSSDPSLSW NGAWLDPSNM GSNSVPSLI
001: MQSKNMIVAS SHQQQQQQQP QQPQPQLKCP RCDSSNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV PVGGSYRKNK RVKRPSTATT TTASTVSTTN
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
101: SSSPNNPHQI SHFSSMNHHP LFYGLSDHMS SCNNNLPMIP SRFSDSSKTC SSSGLESEFL SSGFSSLSAL GLGLPHQMSH DHTINGSFIN NSTTNKPFLL
201: SGLFGSSMSS SSTLLQHPHK PMNNGGDMLG QSHLQTLASL QDLHVGGNNE DMKYKEGKLD QISGNINGFM SSSSSLDPSN YNNMWNNASV VNGAWLDPTN
301: NNVGSSLTSL I
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.