Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g077950.1.1 | Tomato | nucleus | 87.44 | 91.82 |
| KRH21402 | Soybean | nucleus | 41.46 | 46.22 |
| KRH10907 | Soybean | nucleus | 39.2 | 44.19 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 26.13 | 33.77 |
| PGSC0003DMT400033382 | Potato | nucleus | 20.6 | 31.78 |
| GSMUA_Achr10P... | Banana | nucleus | 24.62 | 28.16 |
| PGSC0003DMT400048612 | Potato | nucleus | 19.1 | 28.04 |
| PGSC0003DMT400000349 | Potato | nucleus | 18.59 | 27.92 |
| PGSC0003DMT400058729 | Potato | nucleus | 13.07 | 26.4 |
| Bra030089.1-P | Field mustard | nucleus | 19.6 | 26.17 |
| PGSC0003DMT400047705 | Potato | nucleus | 17.09 | 26.05 |
| CDY72049 | Canola | nucleus | 19.35 | 25.93 |
| PGSC0003DMT400078164 | Potato | nucleus | 20.6 | 25.62 |
| Bra032891.1-P | Field mustard | nucleus | 19.1 | 25.59 |
| CDY70666 | Canola | nucleus | 19.1 | 25.59 |
| Bra010884.1-P | Field mustard | nucleus | 18.34 | 24.75 |
| PGSC0003DMT400001174 | Potato | nucleus | 15.83 | 24.61 |
| PGSC0003DMT400060216 | Potato | nucleus | 18.59 | 24.5 |
| AT1G28310.2 | Thale cress | nucleus | 20.35 | 24.18 |
| CDY15678 | Canola | nucleus | 19.6 | 23.85 |
| PGSC0003DMT400019416 | Potato | nucleus | 18.09 | 23.84 |
| PGSC0003DMT400057782 | Potato | mitochondrion | 16.83 | 23.76 |
| CDX90142 | Canola | nucleus | 18.84 | 23.73 |
| CDY66590 | Canola | nucleus | 19.35 | 23.55 |
| CDY35729 | Canola | nucleus | 17.59 | 23.41 |
| PGSC0003DMT400031928 | Potato | nucleus | 19.35 | 23.19 |
| PGSC0003DMT400069680 | Potato | nucleus | 16.08 | 22.86 |
| PGSC0003DMT400065271 | Potato | nucleus | 17.09 | 22.74 |
| PGSC0003DMT400025984 | Potato | nucleus | 15.83 | 22.5 |
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 19.6 | 21.97 |
| PGSC0003DMT400023033 | Potato | nucleus | 22.11 | 21.84 |
| EER97271 | Sorghum | nucleus | 19.35 | 21.75 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 19.35 | 21.63 |
| PGSC0003DMT400002060 | Potato | nucleus | 14.32 | 21.43 |
| PGSC0003DMT400076397 | Potato | nucleus | 15.33 | 21.4 |
| Zm00001d021591_P001 | Maize | nucleus | 19.1 | 21.11 |
| Zm00001d006463_P001 | Maize | plastid | 18.59 | 21.08 |
| TraesCS2D01G231600.1 | Wheat | nucleus | 18.84 | 21.07 |
| PGSC0003DMT400046598 | Potato | nucleus | 17.34 | 20.91 |
| PGSC0003DMT400041580 | Potato | nucleus | 19.6 | 20.63 |
| PGSC0003DMT400010397 | Potato | nucleus | 16.08 | 20.06 |
| PGSC0003DMT400049288 | Potato | nucleus | 18.59 | 19.79 |
| PGSC0003DMT400075051 | Potato | nucleus | 13.57 | 18.56 |
| PGSC0003DMT400055052 | Potato | nucleus | 14.57 | 18.53 |
Protein Annotations
| EntrezGene:102583952 | MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:M1CWS8 |
| PFAM:PD007478 | PFAM:PF02701 | EnsemblPlantsGene:PGSC0003DMG400029729 | PGSC:PGSC0003DMG400029729 | EnsemblPlants:PGSC0003DMT400076447 | ScanProsite:PS01361 |
| PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF79 | UniParc:UPI00029546C0 | RefSeq:XP_006347015.1 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
Dof zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029729]
Coordinates
chr2:+:33717006..33719272
Molecular Weight (calculated)
43800.8 Da
IEP (calculated)
7.917
GRAVY (calculated)
-0.760
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGECDQKMV LISSSTTNQI WPQIDEKNNL MMDSNGTNAT SNNMEKPIQD PSQQPPPPHL KCPRCDSSNT KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL
101: RNVPVGGGCR KNKRIKRPSV NSSSSTTTTS HDIITTSTPN IVNPSHHHQL HGVHHNNNID HLSTTNSPNH LNPLFYGLTS ERSDLNIPFS RLFNSRVSSH
201: GGGVDEGQVY SITDSIPGLM DRRMGLGFSN SSGGVVNMGH ENNNNYGHGG LYPIKQIQDV HVMSTSNSTT STTSLLSSYP NMFGSSSSTS TMASLIASSL
301: QQQKFMSNIN GNNFHNLLTP NYEELQMSRG NNNNNNNTIN NVHEGGGNGN TMLKEEKMDL SNHQIHEQII NSSDPSLSWN GAWLDPSNMG SNSVPSLI
101: RNVPVGGGCR KNKRIKRPSV NSSSSTTTTS HDIITTSTPN IVNPSHHHQL HGVHHNNNID HLSTTNSPNH LNPLFYGLTS ERSDLNIPFS RLFNSRVSSH
201: GGGVDEGQVY SITDSIPGLM DRRMGLGFSN SSGGVVNMGH ENNNNYGHGG LYPIKQIQDV HVMSTSNSTT STTSLLSSYP NMFGSSSSTS TMASLIASSL
301: QQQKFMSNIN GNNFHNLLTP NYEELQMSRG NNNNNNNTIN NVHEGGGNGN TMLKEEKMDL SNHQIHEQII NSSDPSLSWN GAWLDPSNMG SNSVPSLI
001: MFGNCDQNKK MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
101: RKNKRVKRPS TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH
201: QMSHDHTING SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL
301: DPSNYNNMWN NASVVNGAWL DPTNNNVGSS LTSLI
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein [Source:TAIR;Acc:AT1G28310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.