Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G249200.1 | Wheat | nucleus, plastid | 96.63 | 96.9 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 96.35 | 96.35 |
| EER97271 | Sorghum | nucleus | 70.22 | 70.62 |
| Zm00001d021591_P001 | Maize | nucleus | 70.51 | 69.72 |
| Zm00001d006463_P001 | Maize | plastid | 66.01 | 66.95 |
| TraesCS2D01G076600.1 | Wheat | nucleus | 29.78 | 32.32 |
| TraesCS5D01G093800.2 | Wheat | nucleus | 26.97 | 27.83 |
| TraesCS4D01G207600.1 | Wheat | nucleus | 26.69 | 24.93 |
| VIT_10s0003g00040.t01 | Wine grape | nucleus | 21.07 | 24.35 |
| CDY72049 | Canola | nucleus | 20.22 | 24.24 |
| CDY70666 | Canola | nucleus | 19.94 | 23.91 |
| Bra032891.1-P | Field mustard | nucleus | 19.66 | 23.57 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 23.88 | 23.48 |
| Bra030089.1-P | Field mustard | nucleus | 19.38 | 23.15 |
| TraesCS7D01G215300.1 | Wheat | nucleus | 18.26 | 22.89 |
| Bra010884.1-P | Field mustard | nucleus | 18.26 | 22.03 |
| AT1G28310.2 | Thale cress | nucleus | 20.51 | 21.79 |
| TraesCS6D01G268400.1 | Wheat | nucleus | 17.7 | 21.72 |
| CDY66590 | Canola | nucleus | 19.66 | 21.41 |
| CDY15678 | Canola | nucleus | 19.38 | 21.1 |
| TraesCS1D01G036700.2 | Wheat | nucleus | 21.63 | 21.04 |
| CDY35729 | Canola | nucleus | 17.42 | 20.74 |
| KRH10907 | Soybean | nucleus | 20.51 | 20.68 |
| TraesCS6D01G254200.1 | Wheat | nucleus | 17.7 | 20.59 |
| CDX90142 | Canola | nucleus | 18.26 | 20.57 |
| KRH21402 | Soybean | nucleus | 20.51 | 20.45 |
| KRH20416 | Soybean | nucleus | 19.66 | 19.83 |
| KRH50083 | Soybean | nucleus | 19.38 | 19.83 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 25.0 | 19.56 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 20.51 | 19.31 |
| Solyc02g077950.1.1 | Tomato | nucleus | 20.51 | 19.26 |
| PGSC0003DMT400076447 | Potato | nucleus | 21.07 | 18.84 |
| TraesCS3D01G537400.1 | Wheat | nucleus | 19.66 | 18.62 |
| TraesCS3D01G537500.1 | Wheat | nucleus | 19.66 | 18.32 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 17.42 | 18.13 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 19.1 | 17.89 |
| TraesCS3D01G370100.1 | Wheat | nucleus | 16.57 | 17.82 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 19.1 | 17.39 |
| TraesCS1D01G274700.1 | Wheat | mitochondrion | 16.85 | 15.92 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G231600.1 | EnsemblPlantsGene:TraesCS2D01G231600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF63 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr2D:-:203451257..203452574
Molecular Weight (calculated)
35714.3 Da
IEP (calculated)
7.854
GRAVY (calculated)
-0.265
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGGGTAA AAVVQPAAAA GAGRSSSSSA GAGGGGAGGG PVADPRAEAL RCPRCDSANT KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL RNVPVGGGCR
101: KNKRSRSSNG SGGRPGSCAV VASSNAAAGG IASSTSMSLP PPGSLSSALG LHGHGSSSLA SLLLGSGASG GDHLGLFHAM QSVVSDATAY EMHQQHQTQV
201: DQLLGLGYGA GDANGSQIHI KPWQQHLQDG AGGLFDGFYA PLLSGSIVPG LEELHVKAEA TAGEHHHHHQ KKATDGDQQS WDQHPTSSSS NVEANIMASD
301: ALMAAAAAAS MNPAVSNAAT APTSSPLMYW GNGNIGGSPA TWPDMANCGS SIATFF
101: KNKRSRSSNG SGGRPGSCAV VASSNAAAGG IASSTSMSLP PPGSLSSALG LHGHGSSSLA SLLLGSGASG GDHLGLFHAM QSVVSDATAY EMHQQHQTQV
201: DQLLGLGYGA GDANGSQIHI KPWQQHLQDG AGGLFDGFYA PLLSGSIVPG LEELHVKAEA TAGEHHHHHQ KKATDGDQQS WDQHPTSSSS NVEANIMASD
301: ALMAAAAAAS MNPAVSNAAT APTSSPLMYW GNGNIGGSPA TWPDMANCGS SIATFF
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.