Factsheet for TraesCS2D01G076600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G079200.1	Wheat	nucleus	95.12	95.71
TraesCS2B01G094000.1	Wheat	nucleus	96.04	95.45
HORVU2Hr1G013060.1	Barley	nucleus, plastid	85.37	93.96
Zm00001d033093_P001	Maize	nucleus	59.45	54.17
EER91281	Sorghum	nucleus	63.11	53.77
Zm00001d013783_P001	Maize	nucleus	46.65	52.58
GSMUA_Achr6P25190_001	Banana	nucleus	23.48	29.96
TraesCS2D01G231600.1	Wheat	nucleus	32.32	29.78
GSMUA_Achr7P27030_001	Banana	nucleus, plastid	27.13	27.3
TraesCS5D01G093800.2	Wheat	nucleus	27.44	26.09
TraesCS7D01G215300.1	Wheat	nucleus	20.43	23.59
TraesCS4D01G207600.1	Wheat	nucleus	27.13	23.36
GSMUA_Achr4P16590_001	Banana	nucleus	24.09	23.03
TraesCS6D01G268400.1	Wheat	nucleus	20.12	22.76
TraesCS6D01G254200.1	Wheat	nucleus	20.43	21.9
TraesCS2D01G399500.1	Wheat	nucleus	22.87	19.84
TraesCS6D01G236700.1	Wheat	nucleus	22.56	18.93
TraesCS1D01G036700.2	Wheat	nucleus	21.04	18.85
TraesCS5D01G161000.1	Wheat	nucleus	19.51	18.71
TraesCS3D01G370100.1	Wheat	nucleus	18.29	18.13
TraesCS5D01G493000.1	Wheat	nucleus	24.09	17.36
TraesCS3D01G537400.1	Wheat	nucleus	19.82	17.29
TraesCS5D01G412000.1	Wheat	nucleus	19.51	16.84
TraesCS1D01G274700.1	Wheat	mitochondrion	19.21	16.71
TraesCS3D01G537500.1	Wheat	nucleus	17.99	15.45

Protein Annotations

EnsemblPlants:TraesCS2D01G076600.1	EnsemblPlantsGene:TraesCS2D01G076600	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PANTHER:PTHR31992:SF82	PFAM:PD007478	PFAM:PF02701
PFscan:PS50884	ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:

Description

No Description!

Coordinates

chr2D:+:32763076..32764516

Molecular Weight (calculated)

33040.3 Da

IEP (calculated)

9.135

GRAVY (calculated)

-0.383

Length

328 amino acids

Sequence
(BLAST)

001: MASTTADDAA AGRRKAGTPP ALPPPPAEQA VRCPRCDSPN TKFCYYNNYS LSQPRHFCKT CRRYWTKGGA LRSVPVGGGC RKNKRSRSGS SSSSRGLSLT
101: TPAGGGADQD QQHAARMSMG GFPGGGGGDF RGVVGMLPVL HSPAVVGQYV PFGDWSSGET NGGGAAGRAT NGSAGAGNGA ASSAIASSIE SLSFINQDLH
201: WKLQQQRVAT MFLGPPSASS SSHPHAVGGG SNGMPAAAQF GGGGAFLQMA GLSGCMETLP ATTTWFMDNS YALPSPPRPA AGVGAASSNI NSGRSSGGGG
301: DDNATSDNNN CGGSIPSWGD ISTFAMLP

Best Arabidopsis Sequence Match ( AT5G65590.1 )
(BLAST)

001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP

Arabidopsis Description

DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.