Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400025984 | Potato | nucleus | 90.38 | 83.93 |
| VIT_00s0253g00060.t01 | Wine grape | nucleus | 52.31 | 38.64 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 43.46 | 36.81 |
| GSMUA_Achr10P... | Banana | nucleus | 41.15 | 36.64 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 44.23 | 36.28 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 40.77 | 35.1 |
| KRH76935 | Soybean | nucleus | 45.0 | 34.82 |
| KRH28526 | Soybean | nucleus | 44.62 | 34.22 |
| KRH04709 | Soybean | nucleus | 45.38 | 33.52 |
| CDY08775 | Canola | nucleus | 19.23 | 25.51 |
| HORVU5Hr1G097600.1 | Barley | nucleus, plastid | 20.77 | 23.28 |
| Os03t0764900-01 | Rice | nucleus | 31.15 | 22.56 |
| CDY70312 | Canola | nucleus | 24.23 | 22.18 |
| Solyc05g054510.1.1 | Tomato | nucleus | 25.38 | 22.15 |
| Solyc06g075370.2.1 | Tomato | nucleus | 25.77 | 22.11 |
| Solyc06g071480.2.1 | Tomato | nucleus | 23.46 | 21.86 |
| Bra037822.1-P | Field mustard | nucleus | 23.85 | 21.83 |
| Solyc11g072500.1.1 | Tomato | nucleus | 23.85 | 21.75 |
| Solyc03g082840.2.1 | Tomato | nucleus | 21.54 | 21.71 |
| Zm00001d034163_P001 | Maize | nucleus | 29.62 | 21.33 |
| AT5G65590.1 | Thale cress | nucleus | 25.38 | 20.89 |
| KXG37485 | Sorghum | nucleus | 30.38 | 20.79 |
| Solyc10g009360.2.1 | Tomato | nucleus | 20.77 | 20.69 |
| CDX81292 | Canola | nucleus | 22.31 | 20.57 |
| Solyc02g077960.1.1 | Tomato | nucleus | 23.46 | 20.4 |
| TraesCS5D01G412000.1 | Wheat | nucleus | 29.62 | 20.26 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 29.62 | 20.21 |
| Bra024399.1-P | Field mustard | nucleus | 23.46 | 19.93 |
| CDY70838 | Canola | nucleus | 23.46 | 19.93 |
| Zm00001d013200_P001 | Maize | nucleus, plastid | 28.08 | 19.78 |
| HORVU5Hr1G097620.1 | Barley | nucleus | 29.23 | 19.69 |
| TraesCS5B01G406500.1 | Wheat | nucleus | 28.85 | 19.63 |
| Solyc01g096120.2.1 | Tomato | nucleus | 20.77 | 19.57 |
| CDY33948 | Canola | nucleus | 22.69 | 19.54 |
| Solyc04g070960.1.1 | Tomato | nucleus | 20.0 | 19.48 |
| Solyc06g076030.2.1 | Tomato | nucleus | 25.0 | 19.46 |
| Bra031853.1-P | Field mustard | nucleus | 22.31 | 19.08 |
| CDY37834 | Canola | nucleus | 21.92 | 18.75 |
| Solyc02g078620.1.1 | Tomato | nucleus | 20.38 | 18.66 |
| Solyc03g112930.2.1 | Tomato | nucleus | 23.46 | 18.32 |
| Solyc08g082910.1.1 | Tomato | nucleus | 22.31 | 18.24 |
| Solyc06g005130.2.1 | Tomato | nucleus | 21.15 | 17.86 |
| Solyc11g010940.1.1 | Tomato | nucleus | 25.38 | 17.6 |
| Solyc10g086440.1.1 | Tomato | nucleus | 23.85 | 17.13 |
| Solyc11g066050.1.1 | Tomato | nucleus | 20.77 | 16.93 |
| Solyc09g010680.2.1 | Tomato | nucleus | 24.62 | 16.08 |
| Solyc02g077950.1.1 | Tomato | nucleus | 23.08 | 15.83 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | UniProt:K4BCI0 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF70 | EnsemblPlantsGene:Solyc02g090310.1 |
| EnsemblPlants:Solyc02g090310.1.1 | UniParc:UPI0002769238 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:-:51888135..51888917
Molecular Weight (calculated)
28595.4 Da
IEP (calculated)
8.625
GRAVY (calculated)
-0.578
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQELFAGNT TLIGDDNISN ITPSSSPISC TTSNSNIAPA SANANSENLR CPRCDSPNTK FCYYNNYNLT QPRHFCKTCR RYWTKGGALR NVPIGGGCRK
101: NKSIATSKST AAKFKNSLPF EFIGKSGIFG GFEQEIIPSN YDNNNPFLFS SPHQNHNPIL SLLKGNLHKS IGVNQFPSNN GIWKNNYEEN VGEVQNSRGF
201: QELYQRLKAS TNRCYTDNMH GPSSSSMILD SAPVTGGELG CWNPTLSTWL DLPTANGAYL
101: NKSIATSKST AAKFKNSLPF EFIGKSGIFG GFEQEIIPSN YDNNNPFLFS SPHQNHNPIL SLLKGNLHKS IGVNQFPSNN GIWKNNYEEN VGEVQNSRGF
201: QELYQRLKAS TNRCYTDNMH GPSSSSMILD SAPVTGGELG CWNPTLSTWL DLPTANGAYL
001: MSSHTNLPSP KPVPKPDHRI SGTSQTKKPP SSSVAQDQQN LKCPRCNSPN TKFCYYNNYS LSQPRHFCKS CRRYWTRGGA LRNVPIGGGC RKTKKSIKPN
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
101: SSMNTLPSSS SSQRFFSSIM EDSSKFFPPP TTMDFQLAGL SLNKMNDLQL LNNQEVLDLR PMMSSGRENT PVDVGSGLSL MGFGDFNNNH SPTGFTTAGA
201: SDGNLASSIE TLSCLNQDLH WRLQQQRMAM LFGNSKEETV VVERPQPILY RNLEIVNSSS PSSPTKKGDN QTEWYFGNNS DNEGVISNNA NTGGGGSEWN
301: NGIQAWTDLN HYNALP
Arabidopsis Description
DOF5.7SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.