Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53379 | Canola | nucleus | 81.25 | 94.98 |
| AT2G28510.1 | Thale cress | nucleus | 79.69 | 70.83 |
| CDY70840 | Canola | nucleus | 17.58 | 39.82 |
| PGSC0003DMT400075051 | Potato | nucleus | 42.97 | 37.8 |
| Solyc06g005130.2.1 | Tomato | nucleus | 43.36 | 36.04 |
| CDY09221 | Canola | nucleus | 27.73 | 27.52 |
| CDX80191 | Canola | nucleus | 27.34 | 27.24 |
| CDY31568 | Canola | nucleus | 27.34 | 27.13 |
| CDX71050 | Canola | nucleus | 26.56 | 26.88 |
| CDY50231 | Canola | nucleus | 25.78 | 26.09 |
| CDY04620 | Canola | nucleus | 25.78 | 25.98 |
| CDY00373 | Canola | nucleus | 26.17 | 25.77 |
| CDY07781 | Canola | nucleus | 21.48 | 25.7 |
| CDY08775 | Canola | nucleus | 19.53 | 25.51 |
| CDY29082 | Canola | nucleus | 23.83 | 25.42 |
| CDX90602 | Canola | nucleus | 23.83 | 25.31 |
| CDY61064 | Canola | nucleus | 25.78 | 25.29 |
| CDX88742 | Canola | nucleus | 27.34 | 25.27 |
| VIT_06s0004g03420.t01 | Wine grape | nucleus | 28.91 | 25.0 |
| KRH24943 | Soybean | nucleus | 29.69 | 24.92 |
| CDX78095 | Canola | nucleus | 23.44 | 24.79 |
| CDY59600 | Canola | nucleus | 23.44 | 24.59 |
| KRG89059 | Soybean | nucleus | 29.3 | 24.19 |
| Solyc06g075370.2.1 | Tomato | nucleus | 28.52 | 24.09 |
| PGSC0003DMT400019416 | Potato | nucleus | 28.12 | 23.84 |
| GSMUA_Achr10P... | Banana | nucleus | 24.61 | 23.16 |
| Solyc11g072500.1.1 | Tomato | nucleus | 25.78 | 23.16 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 24.61 | 22.99 |
| GSMUA_Achr11P... | Banana | nucleus | 26.56 | 22.97 |
| GSMUA_Achr10P... | Banana | nucleus | 25.39 | 22.81 |
| CDX87189 | Canola | nucleus | 22.27 | 22.8 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 24.22 | 22.79 |
| GSMUA_Achr11P... | Banana | nucleus | 23.44 | 22.64 |
| KRH22943 | Soybean | nucleus | 25.0 | 22.46 |
| KRH10402 | Soybean | nucleus | 25.0 | 22.46 |
| PGSC0003DMT400065271 | Potato | nucleus | 26.17 | 22.41 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 25.39 | 22.34 |
| CDY51722 | Canola | nucleus | 23.83 | 21.94 |
| CDY16836 | Canola | nucleus | 22.66 | 21.72 |
| CDY07156 | Canola | nucleus | 23.44 | 21.51 |
| CDX79743 | Canola | nucleus | 24.61 | 21.5 |
| CDY72657 | Canola | nucleus | 23.83 | 20.89 |
| CDY40813 | Canola | nucleus | 23.05 | 20.85 |
| CDY02191 | Canola | nucleus | 23.83 | 20.75 |
| CDY42836 | Canola | nucleus | 23.05 | 20.63 |
| CDX93365 | Canola | nucleus | 24.61 | 20.39 |
| CDY65260 | Canola | nucleus | 24.61 | 20.39 |
| CDX74947 | Canola | nucleus | 25.78 | 20.31 |
| CDX91370 | Canola | nucleus | 25.78 | 20.31 |
| CDX73385 | Canola | nucleus | 23.44 | 19.87 |
| CDY33948 | Canola | nucleus | 23.44 | 19.87 |
| CDY37834 | Canola | nucleus | 23.05 | 19.41 |
| CDY70838 | Canola | nucleus | 23.05 | 19.28 |
| CDY70312 | Canola | nucleus | 21.09 | 19.01 |
| CDX86775 | Canola | nucleus | 23.05 | 18.97 |
| CDY16754 | Canola | nucleus | 25.0 | 18.82 |
| CDY71684 | Canola | nucleus | 24.61 | 18.81 |
| CDX81292 | Canola | nucleus | 20.7 | 18.79 |
| CDX92613 | Canola | nucleus | 25.0 | 18.66 |
| CDY71763 | Canola | nucleus | 25.0 | 18.66 |
| CDY03494 | Canola | nucleus | 25.0 | 18.6 |
| CDX71704 | Canola | nucleus | 24.22 | 18.51 |
| CDX87270 | Canola | nucleus | 24.61 | 18.48 |
| CDY69145 | Canola | nucleus, plastid | 22.66 | 18.41 |
| CDY41539 | Canola | nucleus | 26.17 | 18.31 |
| CDY64622 | Canola | nucleus | 23.05 | 18.27 |
| CDX80030 | Canola | nucleus | 25.78 | 18.13 |
| CDY00341 | Canola | nucleus | 25.39 | 17.66 |
| CDY35454 | Canola | nucleus | 23.44 | 17.54 |
| CDX84369 | Canola | nucleus | 25.39 | 17.52 |
| CDY72049 | Canola | nucleus | 20.31 | 17.51 |
| CDY70666 | Canola | nucleus | 20.31 | 17.51 |
| CDY08392 | Canola | nucleus | 23.05 | 17.46 |
| CDY57876 | Canola | nucleus | 24.61 | 17.45 |
| CDY40358 | Canola | nucleus | 22.66 | 17.42 |
| CDX83357 | Canola | nucleus | 25.0 | 17.11 |
| CDX95706 | Canola | nucleus | 24.61 | 17.07 |
| CDY35729 | Canola | nucleus | 19.92 | 17.06 |
| CDX89134 | Canola | extracellular, vacuole | 23.05 | 16.95 |
| CDX90142 | Canola | nucleus | 20.31 | 16.46 |
| CDY70704 | Canola | nucleus | 23.44 | 16.44 |
| CDY27314 | Canola | nucleus | 23.05 | 16.39 |
| CDY61727 | Canola | nucleus | 23.83 | 16.31 |
| CDY15624 | Canola | nucleus | 21.09 | 16.17 |
| CDX95139 | Canola | nucleus | 21.09 | 16.07 |
| CDY40213 | Canola | nucleus | 22.27 | 16.06 |
| CDX76102 | Canola | nucleus | 23.05 | 15.49 |
| CDX77212 | Canola | nucleus | 20.31 | 15.29 |
| CDY15678 | Canola | nucleus | 19.53 | 15.29 |
| CDY61965 | Canola | nucleus | 18.36 | 15.11 |
| CDY66590 | Canola | nucleus | 19.14 | 14.98 |
| CDY06274 | Canola | nucleus | 18.36 | 14.97 |
| CDY31735 | Canola | nucleus | 19.92 | 14.83 |
| CDY55549 | Canola | nucleus | 23.05 | 14.68 |
| CDX80822 | Canola | nucleus | 23.05 | 14.53 |
| CDY55422 | Canola | nucleus | 22.66 | 14.46 |
| CDY04855 | Canola | nucleus | 22.66 | 14.29 |
| CDY24798 | Canola | nucleus | 23.83 | 13.47 |
| CDY08776 | Canola | nucleus | 3.12 | 9.3 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CMC1 | EnsemblPlants:CDX77184 | ProteinID:CDX77184 | ProteinID:CDX77184.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127821001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF69 | UniParc:UPI0004EEBD91 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC04g39790D
Coordinates
chrLK031809:-:1841280..1842846
Molecular Weight (calculated)
28040.7 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.743
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEMKKKQG KGELEGEAQK CPRCESPNTK FCYYNNYSLS QPRYFCKSCR RYWTKGGTLR NVPVGGGCRR NKRSSSSFSK NINKPINFHN DPLHNPLITG
101: MPSPFSYDSI DLNLAFAALH KHPPSQVTPS FGFGGDVSIY GNSTNTHTGV LNGLNIGGQN GNFNGGSLWY GFMSGNDSEN KTTSALGIPL EGNERKQENV
201: NNNNNILENP SKVLLGFPWQ MSGNSAGGVP ETDPGRESWN GFVSSWSSGL LNTPLV
101: MPSPFSYDSI DLNLAFAALH KHPPSQVTPS FGFGGDVSIY GNSTNTHTGV LNGLNIGGQN GNFNGGSLWY GFMSGNDSEN KTTSALGIPL EGNERKQENV
201: NNNNNILENP SKVLLGFPWQ MSGNSAGGVP ETDPGRESWN GFVSSWSSGL LNTPLV
001: MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
101: KRSSSSAFSK NNNNKSINFH TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN DVGIFGGQNG TYNNSLCYGF
201: MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
Arabidopsis Description
DOF2.1Dof zinc finger protein DOF2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LE43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.