Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000008.1-P | Field mustard | nucleus | 98.13 | 71.67 |
| CDX79743 | Canola | nucleus | 94.86 | 69.28 |
| CDX93365 | Canola | nucleus | 88.78 | 61.49 |
| CDY65260 | Canola | nucleus | 88.32 | 61.16 |
| CDX74947 | Canola | nucleus | 91.59 | 60.31 |
| CDX91370 | Canola | nucleus | 91.59 | 60.31 |
| AT2G37590.1 | Thale cress | nucleus | 84.58 | 54.85 |
| CDY70840 | Canola | nucleus | 25.23 | 47.79 |
| Zm00001d034653_P001 | Maize | nucleus | 37.85 | 36.16 |
| VIT_08s0007g00180.t01 | Wine grape | nucleus | 54.67 | 33.91 |
| CDX73385 | Canola | nucleus | 43.93 | 31.13 |
| Solyc10g086440.1.1 | Tomato | nucleus | 50.93 | 30.11 |
| CDY70704 | Canola | nucleus | 50.93 | 29.86 |
| CDY40358 | Canola | nucleus | 46.26 | 29.73 |
| PGSC0003DMT400049288 | Potato | nucleus | 51.87 | 29.68 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 36.92 | 27.62 |
| CDY55549 | Canola | nucleus | 51.87 | 27.61 |
| CDX80822 | Canola | nucleus | 51.87 | 27.34 |
| CDY69145 | Canola | nucleus, plastid | 40.19 | 27.3 |
| CDY55422 | Canola | nucleus | 50.93 | 27.18 |
| CDY40213 | Canola | nucleus | 44.86 | 27.04 |
| CDY04855 | Canola | nucleus | 50.47 | 26.6 |
| Zm00001d034651_P002 | Maize | nucleus | 50.47 | 26.15 |
| CDY08775 | Canola | nucleus | 23.83 | 26.02 |
| Os03t0821200-00 | Rice | nucleus | 50.0 | 25.85 |
| CDY15624 | Canola | nucleus | 40.19 | 25.75 |
| KXG37254 | Sorghum | nucleus | 51.87 | 25.52 |
| CDY53379 | Canola | nucleus | 25.7 | 25.11 |
| CDX95139 | Canola | nucleus | 39.25 | 25.0 |
| CDY61965 | Canola | nucleus | 35.98 | 24.76 |
| CDX76102 | Canola | nucleus | 43.93 | 24.67 |
| CDY29082 | Canola | nucleus | 27.57 | 24.58 |
| CDY06274 | Canola | nucleus | 35.98 | 24.52 |
| CDX90602 | Canola | nucleus | 27.57 | 24.48 |
| CDX77212 | Canola | nucleus | 38.78 | 24.41 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 50.93 | 24.22 |
| CDY31735 | Canola | nucleus | 38.32 | 23.84 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 50.0 | 23.67 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 50.0 | 23.52 |
| CDY59600 | Canola | nucleus | 26.64 | 23.36 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 50.47 | 23.13 |
| CDX78095 | Canola | nucleus | 25.7 | 22.73 |
| CDX80191 | Canola | nucleus | 27.1 | 22.57 |
| CDY31568 | Canola | nucleus | 27.1 | 22.48 |
| CDY09221 | Canola | nucleus | 26.17 | 21.71 |
| CDX87189 | Canola | nucleus | 25.23 | 21.6 |
| CDX77184 | Canola | nucleus | 25.7 | 21.48 |
| CDY16836 | Canola | nucleus | 26.17 | 20.97 |
| CDX71050 | Canola | nucleus | 24.77 | 20.95 |
| CDY40813 | Canola | nucleus | 27.57 | 20.85 |
| CDY02191 | Canola | nucleus | 28.5 | 20.75 |
| CDY42836 | Canola | nucleus | 27.57 | 20.63 |
| CDY51722 | Canola | nucleus | 25.7 | 19.78 |
| CDY07156 | Canola | nucleus | 25.7 | 19.71 |
| CDY70666 | Canola | nucleus | 27.1 | 19.53 |
| CDX88742 | Canola | nucleus | 25.23 | 19.49 |
| CDY70312 | Canola | nucleus | 25.7 | 19.37 |
| CDY04620 | Canola | nucleus | 22.9 | 19.29 |
| CDY70838 | Canola | nucleus | 27.57 | 19.28 |
| CDY33948 | Canola | nucleus | 27.1 | 19.21 |
| CDY72049 | Canola | nucleus | 26.64 | 19.19 |
| CDY71684 | Canola | nucleus | 29.91 | 19.1 |
| CDY37834 | Canola | nucleus | 27.1 | 19.08 |
| CDX87270 | Canola | nucleus | 30.37 | 19.06 |
| CDY50231 | Canola | nucleus | 22.43 | 18.97 |
| CDY72657 | Canola | nucleus | 25.7 | 18.84 |
| CDY16754 | Canola | nucleus | 29.91 | 18.82 |
| CDX92613 | Canola | nucleus | 29.91 | 18.66 |
| CDY71763 | Canola | nucleus | 29.91 | 18.66 |
| CDY03494 | Canola | nucleus | 29.91 | 18.6 |
| CDX81292 | Canola | nucleus | 24.3 | 18.44 |
| CDY00373 | Canola | nucleus | 21.96 | 18.08 |
| CDY15678 | Canola | nucleus | 27.57 | 18.04 |
| CDY66590 | Canola | nucleus | 27.57 | 18.04 |
| CDX86775 | Canola | nucleus | 26.17 | 18.01 |
| CDY08392 | Canola | nucleus | 28.04 | 17.75 |
| CDY00341 | Canola | nucleus | 30.37 | 17.66 |
| CDY64622 | Canola | nucleus | 26.64 | 17.65 |
| CDY61064 | Canola | nucleus | 21.5 | 17.62 |
| CDY35454 | Canola | nucleus | 28.04 | 17.54 |
| CDX71704 | Canola | nucleus | 27.1 | 17.31 |
| CDX84369 | Canola | nucleus | 29.91 | 17.25 |
| CDX90142 | Canola | nucleus | 25.23 | 17.09 |
| CDY41539 | Canola | nucleus | 28.97 | 16.94 |
| CDX80030 | Canola | nucleus | 28.5 | 16.76 |
| CDY35729 | Canola | nucleus | 23.36 | 16.72 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 49.07 | 16.72 |
| CDX89134 | Canola | extracellular, vacuole | 27.1 | 16.67 |
| CDY57876 | Canola | nucleus | 28.04 | 16.62 |
| CDX95706 | Canola | nucleus | 28.5 | 16.53 |
| CDX83357 | Canola | nucleus | 28.5 | 16.31 |
| CDY27314 | Canola | nucleus | 27.1 | 16.11 |
| CDY61727 | Canola | nucleus | 28.04 | 16.04 |
| CDY24798 | Canola | nucleus | 30.37 | 14.35 |
| CDY08776 | Canola | nucleus | 2.8 | 6.98 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 2.8 | 2.71 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078F326 | UniProt:A0A078F326 | EnsemblPlants:CDY07781 | ProteinID:CDY07781 | ProteinID:CDY07781.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00124914001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EE7D5C | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g17300DBnaA03g17300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F326]
Coordinates
chrLK031980:-:939429..940614
Molecular Weight (calculated)
22930.2 Da
IEP (calculated)
9.817
GRAVY (calculated)
-0.697
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSIQAYL DSSNWQQAPP SNHNQGGAGA SDTGGHGVFP QPQSNSSGGS GSIRPGSMVD RARQANVAMP EAALKCPRCE STNTKFCYFN NYSLTQPRHF
101: CKSCRRYWTR GGSLRNVPVG GGYRRNRHTK SSSNNNSTAT SNNTSFTSAA SGNASTISAI LSSNYGGNHE SILSQILYPG RFSSVKGEDN PYKWVNVNGN
201: CSSWIDLSTF GSSS
101: CKSCRRYWTR GGSLRNVPVG GGYRRNRHTK SSSNNNSTAT SNNTSFTSAA SGNASTISAI LSSNYGGNHE SILSQILYPG RFSSVKGEDN PYKWVNVNGN
201: CSSWIDLSTF GSSS
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.