Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004525.1-P | Field mustard | nucleus | 96.43 | 99.72 |
| CDY41539 | Canola | nucleus | 98.35 | 97.81 |
| CDX95706 | Canola | nucleus | 89.29 | 88.08 |
| AT2G46590.2 | Thale cress | nucleus | 89.29 | 88.08 |
| CDX83357 | Canola | nucleus | 89.84 | 87.43 |
| CDY61727 | Canola | nucleus | 89.01 | 86.63 |
| CDY27314 | Canola | nucleus | 84.62 | 85.56 |
| CDX71704 | Canola | nucleus | 61.81 | 67.16 |
| CDY64622 | Canola | nucleus | 56.59 | 63.78 |
| CDY70840 | Canola | nucleus | 19.78 | 63.72 |
| CDX86775 | Canola | nucleus | 54.4 | 63.67 |
| CDY57876 | Canola | nucleus | 61.54 | 62.05 |
| CDX89134 | Canola | extracellular, vacuole | 57.14 | 59.77 |
| KRG97209 | Soybean | nucleus | 34.07 | 49.21 |
| KRH68931 | Soybean | nucleus | 35.44 | 44.03 |
| CDY71684 | Canola | nucleus | 34.89 | 37.91 |
| CDY72657 | Canola | nucleus | 30.22 | 37.67 |
| CDY03494 | Canola | nucleus | 35.44 | 37.5 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 28.57 | 37.14 |
| CDY35454 | Canola | nucleus | 34.89 | 37.13 |
| CDY71763 | Canola | nucleus | 34.89 | 37.03 |
| CDX92613 | Canola | nucleus | 34.89 | 37.03 |
| CDY51722 | Canola | nucleus | 28.02 | 36.69 |
| CDY07156 | Canola | nucleus | 27.75 | 36.2 |
| CDY08392 | Canola | nucleus | 32.97 | 35.5 |
| Zm00001d017575_P001 | Maize | nucleus | 35.99 | 35.03 |
| Zm00001d051439_P001 | Maize | nucleus | 35.16 | 34.88 |
| Os02t0673700-01 | Rice | nucleus | 35.99 | 34.38 |
| Os04t0567800-01 | Rice | nucleus | 33.79 | 33.88 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 34.89 | 33.78 |
| KXG26925 | Sorghum | nucleus | 35.99 | 33.76 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 34.89 | 33.6 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 34.89 | 33.6 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 32.69 | 33.43 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 35.71 | 33.16 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 35.44 | 32.99 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 34.62 | 32.39 |
| CDX87189 | Canola | nucleus | 20.6 | 30.0 |
| CDY29082 | Canola | nucleus | 19.78 | 30.0 |
| CDX90602 | Canola | nucleus | 19.51 | 29.46 |
| CDY31568 | Canola | nucleus | 20.88 | 29.46 |
| CDY53379 | Canola | nucleus | 17.58 | 29.22 |
| CDX80191 | Canola | nucleus | 20.6 | 29.18 |
| CDY07781 | Canola | nucleus | 16.76 | 28.5 |
| CDY09221 | Canola | nucleus | 20.05 | 28.29 |
| KXG31020 | Sorghum | nucleus | 35.44 | 28.23 |
| CDX78095 | Canola | nucleus | 18.68 | 28.1 |
| CDY59600 | Canola | nucleus | 18.68 | 27.87 |
| CDY16836 | Canola | nucleus | 20.33 | 27.72 |
| CDY24798 | Canola | nucleus | 34.34 | 27.59 |
| Zm00001d002642_P001 | Maize | nucleus | 36.26 | 27.56 |
| CDY16754 | Canola | nucleus | 25.27 | 27.06 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 34.89 | 27.02 |
| CDX87270 | Canola | nucleus | 25.27 | 26.98 |
| CDY40813 | Canola | nucleus | 20.88 | 26.86 |
| CDX84369 | Canola | nucleus | 27.2 | 26.68 |
| CDY69145 | Canola | nucleus, plastid | 23.08 | 26.67 |
| CDY00341 | Canola | nucleus | 26.92 | 26.63 |
| CDY02191 | Canola | nucleus | 21.43 | 26.53 |
| CDY08775 | Canola | nucleus | 14.01 | 26.02 |
| CDY42836 | Canola | nucleus | 20.33 | 25.87 |
| CDX73385 | Canola | nucleus | 21.43 | 25.83 |
| CDX77184 | Canola | nucleus | 18.13 | 25.78 |
| CDX71050 | Canola | nucleus | 17.86 | 25.69 |
| CDY70666 | Canola | nucleus | 20.33 | 24.92 |
| CDY72049 | Canola | nucleus | 20.05 | 24.58 |
| CDY35729 | Canola | nucleus | 20.05 | 24.41 |
| CDX88742 | Canola | nucleus | 18.41 | 24.19 |
| CDY50231 | Canola | nucleus | 16.48 | 23.72 |
| CDY65260 | Canola | nucleus | 20.05 | 23.62 |
| CDY04620 | Canola | nucleus | 16.48 | 23.62 |
| CDY00373 | Canola | nucleus | 16.76 | 23.46 |
| CDX90142 | Canola | nucleus | 20.33 | 23.42 |
| CDY61064 | Canola | nucleus | 16.76 | 23.37 |
| CDX93365 | Canola | nucleus | 19.78 | 23.3 |
| CDX79743 | Canola | nucleus | 18.68 | 23.21 |
| CDX74947 | Canola | nucleus | 20.6 | 23.08 |
| CDX76102 | Canola | nucleus | 23.63 | 22.57 |
| CDX91370 | Canola | nucleus | 20.05 | 22.46 |
| CDY66590 | Canola | nucleus | 20.05 | 22.32 |
| CDY15678 | Canola | nucleus | 19.78 | 22.02 |
| CDY40213 | Canola | nucleus | 21.43 | 21.97 |
| CDY15624 | Canola | nucleus | 20.05 | 21.86 |
| CDX95139 | Canola | nucleus | 19.78 | 21.43 |
| CDY40358 | Canola | nucleus | 19.51 | 21.32 |
| CDX77212 | Canola | nucleus | 19.78 | 21.18 |
| CDY31735 | Canola | nucleus | 19.51 | 20.64 |
| CDY70312 | Canola | nucleus | 15.93 | 20.42 |
| CDY70704 | Canola | nucleus | 20.33 | 20.27 |
| CDY70838 | Canola | nucleus | 17.03 | 20.26 |
| CDY61965 | Canola | nucleus | 17.03 | 19.94 |
| CDX81292 | Canola | nucleus | 15.38 | 19.86 |
| CDY06274 | Canola | nucleus | 17.03 | 19.75 |
| CDY37834 | Canola | nucleus | 16.48 | 19.74 |
| CDY33948 | Canola | nucleus | 16.21 | 19.54 |
| CDY04855 | Canola | nucleus | 21.7 | 19.46 |
| CDY55422 | Canola | nucleus | 21.43 | 19.45 |
| CDY55549 | Canola | nucleus | 20.88 | 18.91 |
| CDX80822 | Canola | nucleus | 20.88 | 18.72 |
| CDY08776 | Canola | nucleus | 2.47 | 10.47 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CTA2 | EnsemblPlants:CDX80030 | ProteinID:CDX80030 | ProteinID:CDX80030.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00132911001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI0004EDEB51 |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaA05g01260D
Coordinates
chrLK031819:+:1416940..1418624
Molecular Weight (calculated)
39923.3 Da
IEP (calculated)
9.339
GRAVY (calculated)
-0.802
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATKWTQGF QEMMNVKPMD QIMIPNNNTH QSNTTSSARP STILTPNGVS AAGATVSGVS NNNNTAVVVE RKARPQEKLN CPRCNSTNTK FCYYNNYNLT
101: QPRYFCKGCR RYWTEGGTLR NVPVGGSSRK NKRLSSSSSS SNILQTTPSS LGLTTTLPDL NPPILFSNQI PNKSKGSSQD LNLLSFPVMQ DQHHRVHMSQ
201: FLQMPKMEGN GNITHQQPSS SSSLYGSSPV SALELLRRGV SVSPNSVMPS GPMMDSSNNV MYTSSGFPTM VDYKPSNLSF STDHHQGTGH NNHNRSDDAH
301: HQGRVLFPFG DQMKELSSSI TQEVDHDDNQ QQKSHGNNNN NISSSPNNGY WSGMFSTTGG GSSW
101: QPRYFCKGCR RYWTEGGTLR NVPVGGSSRK NKRLSSSSSS SNILQTTPSS LGLTTTLPDL NPPILFSNQI PNKSKGSSQD LNLLSFPVMQ DQHHRVHMSQ
201: FLQMPKMEGN GNITHQQPSS SSSLYGSSPV SALELLRRGV SVSPNSVMPS GPMMDSSNNV MYTSSGFPTM VDYKPSNLSF STDHHQGTGH NNHNRSDDAH
301: HQGRVLFPFG DQMKELSSSI TQEVDHDDNQ QQKSHGNNNN NISSSPNNGY WSGMFSTTGG GSSW
001: MDATKWTQGF QEMMNVKPME QIMIPNNNTH QPNTTSNARP NTILTSNGVS TAGATVSGVS NNNNNTAVVA ERKARPQEKL NCPRCNSTNT KFCYYNNYSL
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
Arabidopsis Description
DOF2.5Dof zinc finger protein DOF2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.