Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017575_P001 | Maize | nucleus | 76.15 | 93.05 |
| Os02t0673700-01 | Rice | nucleus | 64.11 | 76.9 |
| KXG26925 | Sorghum | nucleus | 53.17 | 62.63 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 47.05 | 60.39 |
| KRG97209 | Soybean | nucleus | 24.95 | 45.24 |
| KRH68931 | Soybean | nucleus | 26.48 | 41.3 |
| AT3G61850.4 | Thale cress | nucleus | 26.91 | 37.96 |
| CDX71704 | Canola | nucleus | 26.91 | 36.72 |
| Bra014418.1-P | Field mustard | nucleus | 24.29 | 35.81 |
| CDX86775 | Canola | nucleus | 24.29 | 35.69 |
| CDX80030 | Canola | nucleus | 28.23 | 35.44 |
| CDY64622 | Canola | nucleus | 24.95 | 35.29 |
| CDY41539 | Canola | nucleus | 28.23 | 35.25 |
| Bra004525.1-P | Field mustard | nucleus | 27.13 | 35.23 |
| AT2G46590.2 | Thale cress | nucleus | 28.23 | 34.96 |
| CDX95706 | Canola | nucleus | 28.23 | 34.96 |
| Bra000429.1-P | Field mustard | nucleus | 28.23 | 34.96 |
| CDY57876 | Canola | nucleus | 27.57 | 34.9 |
| CDX83357 | Canola | nucleus | 28.23 | 34.49 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 31.95 | 33.8 |
| CDX89134 | Canola | extracellular, vacuole | 25.38 | 33.33 |
| CDY61727 | Canola | nucleus | 27.13 | 33.16 |
| CDY27314 | Canola | nucleus | 26.04 | 33.06 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 26.04 | 33.06 |
| EES05649 | Sorghum | nucleus | 18.82 | 29.15 |
| EES07840 | Sorghum | nucleus | 20.57 | 27.65 |
| EES15496 | Sorghum | nucleus | 20.35 | 26.27 |
| OQU79380 | Sorghum | nucleus, vacuole | 18.38 | 24.71 |
| KXG30845 | Sorghum | nucleus | 16.19 | 24.34 |
| KXG39680 | Sorghum | nucleus | 20.57 | 23.86 |
| EES03938 | Sorghum | nucleus | 17.07 | 23.28 |
| KXG37254 | Sorghum | nucleus | 21.44 | 22.53 |
| EES18302 | Sorghum | plastid | 16.85 | 21.04 |
| EER97271 | Sorghum | nucleus | 15.97 | 20.62 |
| KXG37485 | Sorghum | nucleus | 16.63 | 20.0 |
| KXG21095 | Sorghum | nucleus | 16.63 | 19.74 |
| EER91281 | Sorghum | nucleus | 15.32 | 18.18 |
Protein Annotations
| MapMan:15.5.1.5 | UniProt:A0A194YT63 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003851 | EnsemblPlants:KXG31020 |
| ProteinID:KXG31020 | ProteinID:KXG31020.1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | EnsemblPlantsGene:SORBI_3004G284400 | UniParc:UPI0007F29686 | InterPro:Znf_Dof | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:62665490..62669337
Molecular Weight (calculated)
45949.6 Da
IEP (calculated)
9.400
GRAVY (calculated)
-0.381
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEKTREGAG SNSTTQAIHR TFLLPRPSHP VVPAVGGSSS SSSSSSSPVV VLSSSSSSPL VGKRNTGESL ARSGIGILAC MDAAQWHQGL GLGKPMEEML
101: MAGNANPNQN PNPPPPAPSA PGAQRAGAPA AGAAAAPSAG ATGGPAGAGT ERRARPQKEK ALNCPRCNST NTKFCYYNNY SLQQPRYFCK TCRRYWTEGG
201: SLRNVPVGGG SRKNKRSSSA VSSAAAASTS AAMSGTVSVG LPAKNPKLMH EGAHDLNLAF PHHNGRALQP PEFPAFPSLE SSSVCNPGAA GMVGNGAAGR
301: GMGALSAMEL LRSTGCYVPL QHVQLGMPAE YAAAGFALGE FRMPPPPQSH SVLGFSLDTH GTGGVGGAGG YSAGLQDSAA GRLLFPFEDL KPAVSAAAGG
401: GGASNGADHH QYEHSKDQAA GDGGSGPSGV TGGHETPGFW SNSLIGNGSS NGGGGPW
101: MAGNANPNQN PNPPPPAPSA PGAQRAGAPA AGAAAAPSAG ATGGPAGAGT ERRARPQKEK ALNCPRCNST NTKFCYYNNY SLQQPRYFCK TCRRYWTEGG
201: SLRNVPVGGG SRKNKRSSSA VSSAAAASTS AAMSGTVSVG LPAKNPKLMH EGAHDLNLAF PHHNGRALQP PEFPAFPSLE SSSVCNPGAA GMVGNGAAGR
301: GMGALSAMEL LRSTGCYVPL QHVQLGMPAE YAAAGFALGE FRMPPPPQSH SVLGFSLDTH GTGGVGGAGG YSAGLQDSAA GRLLFPFEDL KPAVSAAAGG
401: GGASNGADHH QYEHSKDQAA GDGGSGPSGV TGGHETPGFW SNSLIGNGSS NGGGGPW
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.