CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07840	Sorghum	nucleus	83.33	86.76
EES05649	Sorghum	nucleus	21.47	25.76
KXG26925	Sorghum	nucleus	25.14	22.94
KXG30845	Sorghum	nucleus	19.21	22.37
KXG31020	Sorghum	nucleus	26.27	20.35
EES03938	Sorghum	nucleus	18.93	20.0
EER97271	Sorghum	nucleus	19.21	19.21
OQU79380	Sorghum	nucleus, vacuole	18.36	19.12
KXG39680	Sorghum	nucleus	21.19	19.04
EES18302	Sorghum	plastid	18.93	18.31
KXG37254	Sorghum	nucleus	21.47	17.47
EER91281	Sorghum	nucleus	18.93	17.4
KXG37485	Sorghum	nucleus	18.36	17.11
KXG21095	Sorghum	nucleus	17.23	15.84

Protein Annotations

MapMan:15.5.1.5	UniProt:C5YPQ7	EnsemblPlants:EES15496	ProteinID:EES15496	ProteinID:EES15496.2	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF74	EnsemblPlantsGene:SORBI_3008G001700	UniParc:UPI00081ACFEE	InterPro:Znf_Dof	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:152798..157364

Molecular Weight (calculated)

38040.2 Da

IEP (calculated)

9.177

GRAVY (calculated)

-0.863

Length

354 amino acids

Sequence
(BLAST)

001: MDMSSSTTAA ASAPHNHQQE AMVSSPNIKE EARSPKQAEA TQQPSGSGER KPRPQLAEAL RCPRCNSNNT KFCYYNNYNT MQPRYFCKGC RRYWTHGGTL
101: RNVPVGGGCR KNKRASRSVS GSGSSSSSAA YAPLSPDTNT SSSKMSINTQ PMMVPNMMMP TPTMTGLFPN VLPTLMSTGG GSHFNFTMDN QHASMPFTPM
201: PLSNQASVPM LAAGGSGTMP SFLEMLRRGL LHGSSSYDAG LVMSGGNNEM DMSFPLPAYG AMHGHGLSGS TTDDARQLVG TQQGMNTDSG FAGSTRVQEE
301: EEEKGDNKAM VKSSNNNNGG SLLDRYWTKP NNNNNNNNNN NNNNNNNNNK GQQG

Best Arabidopsis Sequence Match ( AT3G61850.1 )
(BLAST)

001: MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF
101: CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHALEL LRSNGVSSRG MNTFLPGQMM
201: DSNSVLYSSL GFPTMPDYKQ SNNNLSFSID HHQGIGHNTI NSNQRAQDNN DDMNGASRVL FPFSDMKELS STTQEKSHGN NTYWNGMFSN TGGSSW

Arabidopsis Description

DAG1Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:B3H6D1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.