CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0821200-00	Rice	nucleus	75.17	78.99
TraesCS5D01G493000.1	Wheat	nucleus	67.36	64.4
TraesCS5B01G492600.1	Wheat	nucleus	66.21	63.72
TraesCS5A01G479400.1	Wheat	nucleus	67.36	62.74
Zm00001d012963_P001	Maize	plastid, vacuole	80.69	55.89
CDY07781	Canola	nucleus	25.52	51.87
GSMUA_Achr6P33410_001	Banana	nucleus	28.51	50.2
VIT_08s0007g00180.t01	Wine grape	nucleus	39.08	49.28
Solyc10g086440.1.1	Tomato	nucleus	36.55	43.92
Bra000008.1-P	Field mustard	nucleus	29.43	43.69
Bra005181.1-P	Field mustard	nucleus	32.18	43.08
PGSC0003DMT400049288	Potato	nucleus	37.01	43.05
CDX74947	Canola	nucleus	31.95	42.77
CDX93365	Canola	nucleus	30.34	42.72
CDX91370	Canola	nucleus	31.72	42.46
CDY65260	Canola	nucleus	29.89	42.07
CDX79743	Canola	nucleus	28.28	41.98
AT2G37590.1	Thale cress	nucleus	31.72	41.82
Bra017171.1-P	Field mustard	nucleus	29.66	41.75
KXG39680	Sorghum	nucleus	36.55	40.36
OQU79380	Sorghum	nucleus, vacuole	30.34	38.82
KXG21095	Sorghum	nucleus	30.11	34.03
EER97271	Sorghum	nucleus	21.84	26.84
EES05649	Sorghum	nucleus	17.7	26.1
KXG30845	Sorghum	nucleus	17.24	24.67
EER91281	Sorghum	nucleus	21.61	24.42
KXG26925	Sorghum	nucleus	21.38	23.97
EES07840	Sorghum	nucleus	17.7	22.65
EES03938	Sorghum	nucleus	16.55	21.49
EES15496	Sorghum	nucleus	17.47	21.47
KXG31020	Sorghum	nucleus	22.53	21.44
KXG37485	Sorghum	nucleus	17.47	20.0
EES18302	Sorghum	plastid	16.78	19.95
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	6.9	13.57

Protein Annotations

MapMan:15.5.1.5	EntrezGene:8057044	UniProt:C5WV12	ProteinID:EER93190.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	EnsemblPlants:KXG37254	ProteinID:KXG37254	ProteinID:KXG37254.1	ProteinID:OQU90724.1	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	EnsemblPlantsGene:SORBI_3001G034300
UniParc:UPI0001A8297D	RefSeq:XP_002466192.1	InterPro:Znf_Dof	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:2611023..2613615

Molecular Weight (calculated)

43310.2 Da

IEP (calculated)

9.465

GRAVY (calculated)

-0.453

Length

435 amino acids

Sequence
(BLAST)

001: MVFSSVPVYL DPPNWNQHQH QHQPQQQQQQ AHHGQLPSGG AGGGGGGGME AHAHHHHHHQ LPPVPPPGGA LMAPRPDMAA VVAASGGGST PGAGGGPTAG
101: GSAIRPGSMT ERARLAKIPQ PEPGLKCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV GGGCRRNKRT KSSKSNSSSA ASASGAGGTS
201: SSTSSTATGG SSAGGASGAG IMPSHQGHGH LPFLASLHHP LAGGDHYSTG ASRLGFPGLS SLDPVDYHQF GASAGAGGAA LGLEQWRLPQ IQHQFPFLSG
301: RPDAVPPTMS GIYPFDVEGH GGDGTGFAGH MLGASKVPGS AGLITQLASV KMEDNPASAA MANSSPREFL GLPGNLQFWG GGSNGGANGN NGGGAGNAGG
401: GGSGGGGGGG GGTVAPGSSW VDLSGFNSSS SGNVL

Best Arabidopsis Sequence Match ( AT3G55370.2 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGKGGVNQG DSQQKSSDYS NQLMFKPLMD FSSGGVSATQ TRNVKAEEND
301: QDRGRDGDGV NNLSRNFLGN ININSGRNEE YTSWGGNSSW TGFTSNNSTG HLSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.