Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02150_001 | Banana | nucleus | 69.64 | 51.81 |
| GSMUA_Achr11P... | Banana | nucleus | 63.97 | 44.01 |
| GSMUA_Achr10P... | Banana | nucleus | 51.01 | 43.45 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 48.18 | 42.96 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 29.15 | 39.78 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 52.23 | 37.94 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 50.61 | 37.88 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 42.91 | 37.59 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 23.89 | 36.65 |
| Zm00001d034653_P001 | Maize | nucleus | 32.79 | 36.16 |
| GSMUA_Achr10P... | Banana | nucleus | 48.99 | 35.91 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 31.98 | 35.59 |
| VIT_13s0019g01410.t01 | Wine grape | nucleus | 48.18 | 35.31 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 43.72 | 32.53 |
| Os03t0821200-00 | Rice | nucleus | 53.04 | 31.64 |
| HORVU5Hr1G113190.2 | Barley | nucleus, plastid | 34.41 | 29.72 |
| Solyc10g086440.1.1 | Tomato | nucleus | 42.51 | 29.01 |
| CDY69145 | Canola | nucleus, plastid | 36.84 | 28.89 |
| Zm00001d034651_P002 | Maize | nucleus | 48.18 | 28.81 |
| KXG37254 | Sorghum | nucleus | 50.2 | 28.51 |
| PGSC0003DMT400049288 | Potato | nucleus | 42.91 | 28.34 |
| Bra007156.1-P | Field mustard | nucleus | 36.84 | 27.83 |
| CDX73385 | Canola | nucleus | 33.2 | 27.15 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 32.39 | 26.85 |
| GSMUA_Achr11P... | Banana | nucleus | 28.74 | 26.79 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 25.51 | 26.58 |
| TraesCS5B01G492600.1 | Wheat | nucleus | 48.58 | 26.55 |
| HORVU5Hr1G113220.6 | Barley | nucleus | 48.18 | 26.44 |
| Bra014752.1-P | Field mustard | nucleus | 37.25 | 26.29 |
| GSMUA_Achr11P... | Banana | nucleus | 31.17 | 26.19 |
| TraesCS5D01G493000.1 | Wheat | nucleus | 48.18 | 26.15 |
| AT3G55370.3 | Thale cress | nucleus | 38.87 | 26.09 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 48.99 | 25.91 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 23.48 | 25.89 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 30.36 | 25.68 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 27.94 | 25.37 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 26.32 | 25.29 |
| GSMUA_Achr10P... | Banana | nucleus | 27.53 | 25.0 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 26.72 | 24.81 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 19.43 | 24.62 |
| CDY40213 | Canola | nucleus | 35.22 | 24.51 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 26.72 | 24.44 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 27.53 | 24.29 |
| GSMUA_Achr11P... | Banana | nucleus | 26.72 | 24.26 |
| GSMUA_Achr10P... | Banana | nucleus | 27.94 | 24.21 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 25.1 | 24.12 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 24.29 | 24.0 |
| CDX76102 | Canola | nucleus | 36.84 | 23.88 |
| GSMUA_Achr11P... | Banana | nucleus | 28.34 | 23.65 |
| GSMUA_Achr10P... | Banana | nucleus | 24.29 | 23.26 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 26.72 | 23.16 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 20.24 | 23.04 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 27.13 | 23.02 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 25.1 | 22.63 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 23.48 | 22.39 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 32.39 | 22.1 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 27.13 | 21.9 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 21.86 | 21.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.29 | 21.51 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 28.34 | 21.47 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 30.77 | 20.88 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 23.08 | 20.73 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 28.74 | 20.0 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 24.7 | 19.87 |
| GSMUA_Achr10P... | Banana | nucleus | 23.48 | 19.86 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 27.53 | 19.83 |
| Zm00001d012963_P001 | Maize | plastid, vacuole | 50.2 | 19.75 |
| GSMUA_Achr10P... | Banana | nucleus | 27.13 | 19.25 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 23.08 | 18.87 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 23.48 | 18.3 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 28.34 | 16.2 |
| HORVU2Hr1G095390.1 | Barley | cytosol, mitochondrion, nucleus | 8.1 | 9.05 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | EnsemblPlantsGene:GSMUA_Achr6G33410_001 |
| EnsemblPlants:GSMUA_Achr6P33410_001 | EnsemblPlants:GSMUA_Achr6T33410_001 | InterPro:IPR003851 | UniProt:M0TCD4 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI000295D3BF | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
dof zinc finger domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G33410_001]
Coordinates
chr6:+:32459171..32459998
Molecular Weight (calculated)
25786.3 Da
IEP (calculated)
9.639
GRAVY (calculated)
-0.291
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQARFAKV PQPQPGLKCP RCDSTNTKFC YFNNYSLAQP RHFCKTCRRY WTHGGALRNI PVGGGCRHSK RTKSSAGSSS KSSTVTTQAG ASSSSSAAAS
101: SAIGGAITSN IPLLSQLASL HPLPDFGATN FGMGLSGIQA VDTMGFQIGG GGIELETLRL QQMHQFPLLG GPFTRQAQAN PAGSELLTQL ASVNMDSHQL
201: LNSPRQYVGV AHNVQFWTGG GGSSNSSDAG GWATDLSGFN SSSGNIL
101: SAIGGAITSN IPLLSQLASL HPLPDFGATN FGMGLSGIQA VDTMGFQIGG GGIELETLRL QQMHQFPLLG GPFTRQAQAN PAGSELLTQL ASVNMDSHQL
201: LNSPRQYVGV AHNVQFWTGG GGSSNSSDAG GWATDLSGFN SSSGNIL
001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.