Factsheet for GSMUA_Achr11P24420_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P28660_001	Banana	nucleus	59.33	76.9
GSMUA_Achr6P33410_001	Banana	nucleus	44.01	63.97
GSMUA_Achr8P02150_001	Banana	nucleus	54.6	59.04
GSMUA_Achr10P...	Banana	nucleus	47.35	58.62
GSMUA_Achr7P15150_001	Banana	nucleus	29.53	58.56
GSMUA_Achr5P29110_001	Banana	nucleus	48.75	51.47
GSMUA_Achr5P07150_001	Banana	nucleus	46.8	50.91
GSMUA_Achr10P...	Banana	nucleus	45.68	48.66
GSMUA_Achr8P02600_001	Banana	nucleus	36.49	46.45
GSMUA_Achr9P03270_001	Banana	nucleus	27.02	43.69
GSMUA_Achr6P34180_001	Banana	nucleus	39.83	43.07
PGSC0003DMT400078164	Potato	nucleus	37.05	41.56
GSMUA_Achr4P30470_001	Banana	nucleus	17.83	39.75
Solyc06g076030.2.1	Tomato	nucleus	36.77	39.52
GSMUA_Achr8P11850_001	Banana	nucleus	25.63	30.87
GSMUA_Achr11P...	Banana	nucleus	25.07	30.61
GSMUA_Achr1P20550_001	Banana	nucleus	22.01	29.26
GSMUA_Achr3P13830_001	Banana	nucleus	22.01	29.04
GSMUA_Achr11P...	Banana	nucleus	22.01	29.04
GSMUA_Achr8P32880_001	Banana	nucleus	20.06	28.8
GSMUA_Achr6P25190_001	Banana	nucleus	20.61	28.79
GSMUA_Achr3P18260_001	Banana	nucleus	17.83	28.57
GSMUA_Achr5P19980_001	Banana	nucleus	21.17	28.57
GSMUA_Achr11P...	Banana	nucleus	20.89	28.3
GSMUA_Achr1P03930_001	Banana	nucleus	20.06	28.02
GSMUA_Achr10P...	Banana	nucleus	21.17	27.94
GSMUA_Achr3P10670_001	Banana	nucleus	17.83	27.0
GSMUA_Achr10P...	Banana	nucleus	19.22	26.74
GSMUA_Achr5P23930_001	Banana	nucleus	14.48	26.67
GSMUA_Achr5P07290_001	Banana	nucleus	20.33	26.64
GSMUA_Achr4P27160_001	Banana	nucleus	20.61	26.43
GSMUA_Achr5P15160_001	Banana	nucleus	21.45	26.37
GSMUA_Achr3P29620_001	Banana	nucleus	20.61	25.96
GSMUA_Achr10P...	Banana	nucleus	20.33	25.61
GSMUA_Achr1P17670_001	Banana	nucleus	15.32	25.35
GSMUA_Achr11P...	Banana	nucleus	20.89	25.34
GSMUA_Achr9P04290_001	Banana	nucleus	20.33	25.09
GSMUA_Achr2P23020_001	Banana	nucleus	18.94	24.73
GSMUA_Achr5P01010_001	Banana	nucleus	17.83	24.71
GSMUA_Achr7P27030_001	Banana	nucleus, plastid	22.28	24.54
GSMUA_AchrUn_...	Banana	nucleus	18.94	24.37
GSMUA_Achr8P15860_001	Banana	nucleus, plastid	24.23	23.9
GSMUA_Achr9P11530_001	Banana	nucleus, plastid	23.68	23.48
GSMUA_Achr6P19530_001	Banana	nucleus	15.88	23.08
GSMUA_Achr4P16590_001	Banana	nucleus	22.01	23.03
GSMUA_Achr9P25010_001	Banana	nucleus	19.5	22.88
GSMUA_Achr8P02840_001	Banana	nucleus	19.22	22.48
GSMUA_Achr5P12010_001	Banana	nucleus	22.01	22.25
GSMUA_Achr10P...	Banana	nucleus	17.55	21.58
GSMUA_Achr9P09650_001	Banana	nucleus	18.11	21.52
GSMUA_Achr9P26560_001	Banana	nucleus	18.38	20.82
GSMUA_Achr10P...	Banana	nucleus	20.06	20.69
GSMUA_Achr2P09970_001	Banana	nucleus	21.73	18.06

Protein Annotations

MapMan:15.5.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G24420_001	EnsemblPlants:GSMUA_Achr11P24420_001	EnsemblPlants:GSMUA_Achr11T24420_001
InterPro:IPR003851	UniProt:M0RV22	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF61	UniParc:UPI0002959748	InterPro:Znf_Dof	SEG:seg	:

Description

dof zinc finger domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G24420_001]

Coordinates

chr11:-:23974954..23976165

Molecular Weight (calculated)

37162.6 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.318

Length

359 amino acids

Sequence
(BLAST)

001: MVFPSVPVFL DPPNWNQVSS LLPCLIFSSD AFHQQAHQQG NSGRGGGEAS QLPPGLAAPR PDGGMAGLMR PGSMADRARL AKIPQPEPGL KCPRCDSTNT
101: KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR RNKRTKSTAG GSSSKSSNTT TQTGASSSSS TATSSGVGGA IASTTLLASQ LPFMASLHPL
201: PDFAATNFGV SFSGIQPVDT LDYQLGGGGS SAPGGGVGME NLRLQQMQQF SLIGGLDLPQ PPAPAPTPAS GLFSFVGDGG GFIGGSSTGQ AQTKPTNSGL
301: ITQLASVKMD DSQQLLGFPR PYLGVSRNDQ FWSGGGSSSS TGGWMTDLSG FNSSSSNIF

Best Arabidopsis Sequence Match ( AT5G02460.1 )
(BLAST)

001: MVFSSFPTYP DHSSNWQQQH QPITTTVGFT GNNINQQFLP HHPLPPQQQQ TPPQLHHNNG NGGVAVPGGP GGLIRPGSMA ERARLANIPL PETALKCPRC
101: DSTNTKFCYF NNYSLTQPRH FCKACRRYWT RGGALRSVPV GGGCRRNKRT KNSSGGGGGS TSSGNSKSQD SATSNDQYHH RAMANNQMGP PSSSSSLSSL
201: LSSYNAGLIP GHDHNSNNNN ILGLGSSLPP LKLMPPLDFT DNFTLQYGAV SAPSYHIGGG SSGGAAALLN GFDQWRFPAT NQLPLGGLDP FDQQHQMEQQ
301: NPGYGLVTGS GQYRPKNIFH NLISSSSSAS SAMVTATASQ LASVKMEDSN NQLNLSRQLF GDEQQLWNIH GAAAASTAAA TSSWSEVSNN FSSSSTSNI

Arabidopsis Description

DOF5.1Dof zinc finger protein DOF5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.